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scnpilot_p_inoc_scaffold_239_curated

Search features with annotation key words

Displaying items 31-60 of 192 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_239_curated_31
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35913..37370)
DNA (1458bp) protein (486aa)
RND transporter n=1 Tax=Sphingomonas echinoides RepID=UPI00026CDBD4
Putative efflux pump outer membrane protein {ECO:0000313|EMBL:GAO39401.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
outer membrane efflux protein
scnpilot_p_inoc_scaffold_239_curated_32
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37378..38373)
DNA (996bp) protein (332aa)
acriflavine resistance protein E n=1 Tax=Sphingomonas elodea RepID=UPI0002630766
Hemolysin D {ECO:0000313|EMBL:AJP74708.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
efflux pump periplasmic linker protein; K03585 membrane fusion protein
scnpilot_p_inoc_scaffold_239_curated_33
unknown

Not on your lists

39414..39665
DNA (252bp) protein (84aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_239_curated_34
unknown

Not on your lists

39842..40939
DNA (1098bp) protein (366aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_239_curated_35
Sphingobium sp. Ant17, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40947..41552
DNA (606bp) protein (202aa)
Putative alkaline phosphatase-like protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6UEF2_9RHOB
Alkaline phosphatase {ECO:0000313|EMBL:EXS70063.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. Ant17.;"
DedA family protein
scnpilot_p_inoc_scaffold_239_curated_36
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

41614..42399
DNA (786bp) protein (262aa)
hypothetical protein n=1 Tax=Sandarakinorhabdus sp. AAP62 RepID=UPI000370F61A
Uncharacterized protein {ECO:0000313|EMBL:KIF12024.1}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
hypothetical protein
scnpilot_p_inoc_scaffold_239_curated_37
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42503..43426
DNA (924bp) protein (308aa)
Putative LysR family transcriptional regulator n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A6M3_9SPHN
Putative LysR family transcriptional regulator {ECO:0000313|EMBL:GAD50383.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
LysR family transcriptional regulator
scnpilot_p_inoc_scaffold_239_curated_38
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43458..43766
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S3S9_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EZP81836.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;"
hypothetical protein
scnpilot_p_inoc_scaffold_239_curated_39
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43781..44005)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4SIM2_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH50427.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
scnpilot_p_inoc_scaffold_239_curated_40
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44002..45222)
DNA (1221bp) protein (407aa)
Conjugation TrbI family protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S658_9SPHN
conjugation TrbI family protein
Conjugation TrbI family protein {ECO:0000313|EMBL:AGH50428.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
scnpilot_p_inoc_scaffold_239_curated_41
Sphingobium sp. AP49, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45219..46235)
DNA (1017bp) protein (339aa)
P-type conjugative transfer protein TrbG n=1 Tax=Sphingobium sp. AP49 RepID=J2LCU1_9SPHN
P-type conjugative transfer protein TrbG {ECO:0000313|EMBL:EJK85276.1}; Flags: Precursor;; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. AP49.;"
conjugal transfer protein TrbG
scnpilot_p_inoc_scaffold_239_curated_42
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46232..46915)
DNA (684bp) protein (228aa)
Conjugal transfer protein TrbF n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S323_9SPHN
conjugal transfer protein TrbF
Conjugal transfer protein TrbF {ECO:0000313|EMBL:AGH50430.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
scnpilot_p_inoc_scaffold_239_curated_43
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46919..48229)
DNA (1311bp) protein (437aa)
Conjugal transfer protein TrbL n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YP39_9SPHN
Conjugal transfer protein TrbL {ECO:0000313|EMBL:GAD50377.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
conjugal transfer protein TrbL
scnpilot_p_inoc_scaffold_239_curated_44
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48231..48533)
DNA (303bp) protein (101aa)
Conjugal transfer protein TrbK n=1 Tax=Sphingomonas sp. MM-1 RepID=M4SIM7_9SPHN
conjugal transfer protein TrbK
Conjugal transfer protein TrbK {ECO:0000313|EMBL:AGH50432.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
scnpilot_p_inoc_scaffold_239_curated_45
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48538..49296)
DNA (759bp) protein (253aa)
Conjugal transfer protein TrbJ n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S664_9SPHN
conjugal transfer protein TrbJ
Conjugal transfer protein TrbJ {ECO:0000313|EMBL:AGH50433.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
scnpilot_p_inoc_scaffold_239_curated_46
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49293..51782)
DNA (2490bp) protein (830aa)
Conjugal transfer ATPase TrbE n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S7E5_9SPHN
Conjugal transfer ATPase TrbE {ECO:0000313|EMBL:AGH50434.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
conjugal transfer ATPase TrbE
scnpilot_p_inoc_scaffold_239_curated_47
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51779..52060)
DNA (282bp) protein (94aa)
Type IV secretory pathway, VirB3 family protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S329_9SPHN
type IV secretory pathway, VirB3 family protein
Type IV secretory pathway, VirB3 family protein {ECO:0000313|EMBL:AGH50435.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
scnpilot_p_inoc_scaffold_239_curated_48
Sphingobium sp. AP49, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52057..52392)
DNA (336bp) protein (112aa)
Type IV secretory pathway, VirB2 component (Pilin) n=1 Tax=Sphingobium sp. AP49 RepID=J2WPQ8_9SPHN
Type IV secretory pathway, VirB2 component (Pilin) {ECO:0000313|EMBL:EJK84235.1}; Flags: Precursor;; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. AP49.;"
conjugal transfer protein TrbC; K03197 type IV secretion system protein VirB2
scnpilot_p_inoc_scaffold_239_curated_49
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52389..53429)
DNA (1041bp) protein (347aa)
Conjugal transfer protein TrbB n=1 Tax=Sphingomonas sp. MM-1 RepID=M4SIN3_9SPHN
P-type conjugative transfer ATPase TrbB {ECO:0000313|EMBL:EZP81825.1}; Flags: Precursor;; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;"
conjugal transfer protein TrbB
scnpilot_p_inoc_scaffold_239_curated_50
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53548..53976)
DNA (429bp) protein (143aa)
Helix-turn-helix domain-containing protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S672_9SPHN
Helix-turn-helix domain-containing protein {ECO:0000313|EMBL:EZP81824.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;"
helix-turn-helix domain-containing protein
scnpilot_p_inoc_scaffold_239_curated_51
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53986..55959)
DNA (1974bp) protein (658aa)
Conjugal transfer coupling protein TraG n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S7F2_9SPHN
Conjugal transfer coupling protein TraG {ECO:0000313|EMBL:AGH50439.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
conjugal transfer coupling protein TraG
scnpilot_p_inoc_scaffold_239_curated_52
Sphingobium sp. AP49, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55975..57849)
DNA (1875bp) protein (625aa)
Type IV secretory pathway, VirD2 component (Relaxase) n=1 Tax=Sphingobium sp. AP49 RepID=J2WPQ5_9SPHN
Type IV secretory pathway, VirD2 component (Relaxase) {ECO:0000313|EMBL:EJK84230.1}; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. AP49.;"
hypothetical protein
scnpilot_p_inoc_scaffold_239_curated_53
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57974..58885)
DNA (912bp) protein (304aa)
Lytic transglycosylase n=1 Tax=Sphingobium lactosutens DS20 RepID=T0HGI8_9SPHN
Putative transglycosylase {ECO:0000313|EMBL:EZP81821.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;"
lytic transglycosylase subunit
scnpilot_p_inoc_scaffold_239_curated_54
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58890..59225)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Sphingobium sp. AP49 RepID=J2WMK0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EZP81820.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;"
hypothetical protein
scnpilot_p_inoc_scaffold_239_curated_55
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(59262..59807)
DNA (546bp) protein (182aa)
Conjugal transfer protein TraF n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YNG9_9SPHN
Type IV secretory pathway, protease TraF {ECO:0000313|EMBL:EZP81819.1}; Flags: Precursor;; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;"
conjugal transfer protein TraF
scnpilot_p_inoc_scaffold_239_curated_56
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(59804..60310)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZYC4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EZP81818.1}; Flags: Precursor;; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;"
hypothetical protein
scnpilot_p_inoc_scaffold_239_curated_57
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60307..60573)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S339_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH50445.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
scnpilot_p_inoc_scaffold_239_curated_58
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60705..61064)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S3V1_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH50446.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
scnpilot_p_inoc_scaffold_239_curated_59
Sphingobium sp. AP49, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61267..61488)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Sphingobium sp. AP49 RepID=J2KWI3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EJK79491.1}; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. AP49.;"
hypothetical protein
scnpilot_p_inoc_scaffold_239_curated_60
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61636..61908)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Sphingobium sp. AP49 RepID=J2D9Y1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EZP81813.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;"
hypothetical protein
Displaying items 31-60 of 192 in total

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