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scnpilot_p_inoc_scaffold_239_curated_31

Organism: scnpilot_dereplicated_Magnetospirillum_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(35913..37370)

Top 3 Functional Annotations

Value Algorithm Source
RND transporter n=1 Tax=Sphingomonas echinoides RepID=UPI00026CDBD4 similarity UNIREF
DB: UNIREF100
  • Identity: 62.7
  • Coverage: 480.0
  • Bit_score: 562
  • Evalue 5.30e-157
Putative efflux pump outer membrane protein {ECO:0000313|EMBL:GAO39401.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.7
  • Coverage: 477.0
  • Bit_score: 597
  • Evalue 1.60e-167
outer membrane efflux protein similarity KEGG
DB: KEGG
  • Identity: 60.5
  • Coverage: 476.0
  • Bit_score: 530
  • Evalue 5.40e-148

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Taxonomy

Sphingomonas changbaiensis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1458
ATGATTTCACGCGCTTTCGTCGCTCGGCCGGTCATCGCTGCGCTGACGCTGGTCCTGCTGAGCGGATGCTCGCTTGCGCCACGTTATGAACGGCCGCCGCCGCCGGTCACCCCCTCCTGGCCGGTCGGCGACGCCTATCTGCCCCAGAGCGAGGCAGATCTCGCCAGCTTGAGCTTCGATCAGGTGGTCCGCGACGCCCGCCTGCGCCAACTGATCGAGGCCGCGCTTGTCAATAATCGCGACTTGCGTGTGGCGGCCGCTAATATCGAAGTCGCTCGCGCCCAATATCGCATCCAGCGCGCCGAACTGCTGCCTGTCGTCGCCGCAAACGCCACCGTCGATCGCAATCGCGGCGGCACCTCGGGCGCGATCGAAAGCGCGACGGATTCCGCGACGGTCTCGACCTTCTACACGGTAAGCGGCGGCATCACCGCGTTCGAGATCGACCTGTTCGGTCGCATCCGTTCCTTAAGCGACGCGGCGCTCAACCGGTTTTTCGCCACCGAAGCCGCAGCCCGTGCCACGCGCCTGACCCTGGTCGGCGACATCGCGACTGCCTGGCTCACCTATGCGGCCGACGAGAGCCTCTATGACGTCGCCTTAGAGACCGAACGCAACGCCCGGCGCAGCGTGGAGCTTACCGGCGCGCGGCTGAGCGGCGGCATCGCCCCGCGCACCGATCTGCGCCAGGCCGAGCAGATTCTGGCCCAGGCGCAATCTGACCTGGCGGCAAGCCGCACCGCGCTGGCCCGCGACGTCAACGCCCTGACCTTGCTGGTCGGCGCGCCTGTCGACGCCGCGCTGCTGCCTGCTTCGATCGAACAGGTTGCTGAGAGCGTGGGCGAAGTGCCCGCCGGGCTCGATTCATCGGTCCTGCTGCGCCGCCCGGACGTGCTCCAGGCGGAATATCAGCTGCGCGCCGCCAATGCCCGGATCGGCGCGGCCCGCGCGGCGCTGTTCCCACGGATCTCCCTCACCTCGGCCCTTGGCTTTGCCAGCCCGGCGCTCAGCAGTTTGTTCGCCAATGGCTCGTTCAACTGGTCGGTCGCGCCTAGCGTCGACTACAACATCTTCCAGGGTGGGGCAGGCCGCGCCGGCGTGCGCCAGAGCCAGGCGGAGCGCGACGCCGCGCTCGCCACCTATGAAGGCGCGATCCAGACGGCATTCCGCGAGGTTGCTGACGCGCTGGCTCGCCGCGGCACCATTGGCGACCAGCTCCGCGCCGATACGTCGCTGGTCGCCGCCGCCCAGGATACCGCCCGGCTGACCGAGGCACGGTATCGCGGCGGGATCGATCCGTTTCTGACCGTCCTCGACGCGCAACGCTCGCTCTACGCGGCACAGCGCACGCTGGTGACGACGCGGCTCATCCGCGCGACAAACCTGGTTACGCTCTACCGTACACTGGGGGGCGATCCTGGACTTGATGGGCGGTCGGACCTGGCAACCGGCAACTGA
PROTEIN sequence
Length: 486
MISRAFVARPVIAALTLVLLSGCSLAPRYERPPPPVTPSWPVGDAYLPQSEADLASLSFDQVVRDARLRQLIEAALVNNRDLRVAAANIEVARAQYRIQRAELLPVVAANATVDRNRGGTSGAIESATDSATVSTFYTVSGGITAFEIDLFGRIRSLSDAALNRFFATEAAARATRLTLVGDIATAWLTYAADESLYDVALETERNARRSVELTGARLSGGIAPRTDLRQAEQILAQAQSDLAASRTALARDVNALTLLVGAPVDAALLPASIEQVAESVGEVPAGLDSSVLLRRPDVLQAEYQLRAANARIGAARAALFPRISLTSALGFASPALSSLFANGSFNWSVAPSVDYNIFQGGAGRAGVRQSQAERDAALATYEGAIQTAFREVADALARRGTIGDQLRADTSLVAAAQDTARLTEARYRGGIDPFLTVLDAQRSLYAAQRTLVTTRLIRATNLVTLYRTLGGDPGLDGRSDLATGN*