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scnpilot_p_inoc_scaffold_239_curated_52

Organism: scnpilot_dereplicated_Magnetospirillum_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(55975..57849)

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretory pathway, VirD2 component (Relaxase) n=1 Tax=Sphingobium sp. AP49 RepID=J2WPQ5_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 92.6
  • Coverage: 624.0
  • Bit_score: 1155
  • Evalue 0.0
Type IV secretory pathway, VirD2 component (Relaxase) {ECO:0000313|EMBL:EJK84230.1}; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. AP49.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.6
  • Coverage: 624.0
  • Bit_score: 1155
  • Evalue 0.0
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 89.2
  • Coverage: 586.0
  • Bit_score: 1044
  • Evalue 0.0

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Taxonomy

Sphingobium sp. AP49 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1875
GTGGCTTCACGCGGGGGCATCGGTCGGCGCGCGTGCCGCGCGGAAGGGAAAAGCCAACAAAAACAGCGCCTCCAATGGCACCACAGGCCATTTTCGGCCGAAAGCGGCCCGGCCGTGAGTGAGGACAGCGAGTTGCGCGTCCGGCCGGGCAAGGCCAAGCGCAGCAAGGCGCAGGGCCGCAATGCCCGCGGCCTGGTCGCGGAGGTGCTGCGCGTTGCAGCGATCCACAGCGGCGGCCGGCGCGGCGGCGCCAGCGGCGCGCGCCGGGGTGCGCAATCGACCTTCGGGCGTGGACGCACCGCCTTCGCCCACAGTCGCCTATTCGGCTCGGGCCGGCGCGTCATGGTCAAGGTGCTGCCCGTGACCACCCGCAGCCGGGGTGGCCGGCGCTCGGCGCCGCTGTCCGCGCACGTCGATTATTTGAAGCGCGAAGGCGTCACCCGCGACGGCTCGCCTACTCGGATGTTCGACGCGGCCGGCGACAATGCCGACGATCGCGGTTTCGCCGAGCGGTGCAAGGATGATCGGCATCATTTCCGGGTCATCGTGTCGCCCGAGGACGCCGCCGAGCTGACCGACCTGCGCGAATACACGCGCGACCTCATGCGTCAGATGGAGGCGGACCTTGGGACGCGGCTCGATTGGGTCGCGGTCGATCACTGGAACACCGACAATCCGCACGTCCATTTGCTCGTGCGCGGCGTTACCGATCAGGGCGCCGATCTCGTCATCTCCCGCGACTACATCAGCCACAATCTCCGCTCGCGCGCGCAAGACCTGGCCTTCGCCGAGCTTGGGCCGAAGCCCGAACATGCGGTGCAGCGCGCGCTCGACGGCGAGGTGACGGCGGAACGCTGGACCCGGCTCGATACCGAGATCAAGCGCGCGTCCGACGCGCTGGGCGTGATCGACCTGCGCCCCGAGCGGCCCGGCCCAGACGATCCGCGCCTCCGCCGTCTGATGGTCGGGCGCTTGCAGCACCTGGAAATGATGGGGCTTGCAGCCGAAGGAGATACCGGCCAATGGGCGGTCGCGGAAGGTGCGGCGGCGACGCTGCGCGAGTTGGGCGCGCGCGGCGACATCATCCGCACGATCGGCGCGGCGCTCAAGGATCGGGGGCAGGACCGGCCGCTCGACAGTTACGCCGTCGTCACCAGCGCGCCCGAGAAGCCGATCGCCGGCCGGCTGATCGACAAGGGGTTGCACGACGAGCTGACCGGGGCCGCCTATGCCGTGATCGACGGCACGGACGGGCGCACCCACCATGTTCGCCTGCCGGGCATCGAGGCGCTGGAGCATAGCCCCAAGCTCGGCGGCATCGTCGAGCTGCGTGGCGTCGGCCGGCCCGGCGAGGAGAAGCCGACGCTGGTGCTCGCCACGCGGTCGGACATAGACCTTGCCGCGCAGGTGAAAGCGCCCGGCGCGACCTGGCTTGACCATCGCCTGATCGAGCGTGGCGCCGGTGTCGCGGATGGCGGGTTCGGCGCCGAGGTGCGCCGCGCGATGGACGCGCGCACCGACCATCTTGTCCGTGAAGGGCTGGCGCGCCGCTTCGGCGAGCGGACGGTGTTCGAGCGCGGGATGCTCGACACGCTCCGCAAGCGCGAGCTGGACGCGGTTGGAGCGAAGATCGCAGGGGAGACCGGGCTTGCCTATCGCCCCGCCGCGTCCGGCGAGAAGATCGCCGGCGTCGTGCGGCAACGCCTCGCGCTCGCGTCAGGCCGCTTCGCCATGATCGACGACGGGCTCGGCTTCCGGCTCGTGCCGTGGGCCACCACACTCGAACAACAGCTTGGCCGTCAGGTGTCGGGCGTCGTCCGCGCCGGCGGCGGCATCGACTGGACGCTCGGCCGAAAACGCGGCCTCGACATCTAA
PROTEIN sequence
Length: 625
VASRGGIGRRACRAEGKSQQKQRLQWHHRPFSAESGPAVSEDSELRVRPGKAKRSKAQGRNARGLVAEVLRVAAIHSGGRRGGASGARRGAQSTFGRGRTAFAHSRLFGSGRRVMVKVLPVTTRSRGGRRSAPLSAHVDYLKREGVTRDGSPTRMFDAAGDNADDRGFAERCKDDRHHFRVIVSPEDAAELTDLREYTRDLMRQMEADLGTRLDWVAVDHWNTDNPHVHLLVRGVTDQGADLVISRDYISHNLRSRAQDLAFAELGPKPEHAVQRALDGEVTAERWTRLDTEIKRASDALGVIDLRPERPGPDDPRLRRLMVGRLQHLEMMGLAAEGDTGQWAVAEGAAATLRELGARGDIIRTIGAALKDRGQDRPLDSYAVVTSAPEKPIAGRLIDKGLHDELTGAAYAVIDGTDGRTHHVRLPGIEALEHSPKLGGIVELRGVGRPGEEKPTLVLATRSDIDLAAQVKAPGATWLDHRLIERGAGVADGGFGAEVRRAMDARTDHLVREGLARRFGERTVFERGMLDTLRKRELDAVGAKIAGETGLAYRPAASGEKIAGVVRQRLALASGRFAMIDDGLGFRLVPWATTLEQQLGRQVSGVVRAGGGIDWTLGRKRGLDI*