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scnpilot_p_inoc_scaffold_239_curated

Search features with annotation key words

Displaying items 61-90 of 192 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_239_curated_61
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62455..63297)
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YNG2_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD50355.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
hypothetical protein
scnpilot_p_inoc_scaffold_239_curated_62
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(63620..64228)
DNA (609bp) protein (203aa)
Cobalt transporter n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FEN4_9RHIZ
Cobalt transporter {ECO:0000313|EMBL:ESX69988.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
transporter rbh
scnpilot_p_inoc_scaffold_239_curated_63
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(64232..64612)
DNA (381bp) protein (127aa)
Putative fluoride ion transporter CrcB n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=CRCB_GRABC
crcB family protein; K06199 CrcB protein
Putative fluoride ion transporter CrcB {ECO:0000255|HAMAP-Rule:MF_00454}; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
scnpilot_p_inoc_scaffold_239_curated_64
Sphingobium sp. AP49, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(64863..65162)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Sphingobium sp. AP49 RepID=J2WA42_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EJK79495.1}; Flags: Precursor;; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. AP49.;"
hypothetical protein
scnpilot_p_inoc_scaffold_239_curated_65
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

65753..66085
DNA (333bp) protein (111aa)
ArsR family transcriptional regulator n=1 Tax=Sphingomonas melonis RepID=UPI000364DB9A
Sphingomonas taxi strain 30a NODE_45, whole genome shotgun sequence {ECO:0000313|EMBL:KIU25985.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
ArsR family transcriptional regulator
scnpilot_p_inoc_scaffold_239_curated_66
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

66100..66528
DNA (429bp) protein (143aa)
Arsenate reductase {ECO:0000256|RuleBase:RU362029}; EC=1.20.4.1 {ECO:0000256|RuleBase:RU362029};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
Arsenate reductase n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6F1X8_SPHCR
arsenate reductase
scnpilot_p_inoc_scaffold_239_curated_67
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

66528..67595
DNA (1068bp) protein (356aa)
arsenic transporter n=1 Tax=Sphingomonas melonis RepID=UPI00035FB066
Arsenite export protein {ECO:0000313|EMBL:EZP81806.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;"
bile acid:sodium symporter; K03325 arsenite transporter, ACR3 family
scnpilot_p_inoc_scaffold_239_curated_68
Novosphingobium sp. MBES04, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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67595..68341
DNA (747bp) protein (249aa)
arsenic resistance protein ArsH n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0003080FDE
Arsenical resistance protein ArsH {ECO:0000313|EMBL:GAM07652.1}; TaxID=1206458 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MBES04.;"
arsH; arsenical resistance protein ArsH; K11811 arsenical resistance protein ArsH rbh
scnpilot_p_inoc_scaffold_239_curated_69
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(68497..70575)
DNA (2079bp) protein (693aa)
Plasmid stablization protein ParB n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0G7Y5_9SPHN
Putative transcriptional regulator {ECO:0000313|EMBL:EZP81804.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;"
nuclease
scnpilot_p_inoc_scaffold_239_curated_70
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

71240..71488
DNA (249bp) protein (83aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q20YW1_RHOPB
Bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase {ECO:0000313|EMBL:EZP81803.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;"
hypothetical protein
scnpilot_p_inoc_scaffold_239_curated_71
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

71485..71907
DNA (423bp) protein (141aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;"
Ribonuclease VapC n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q20YW0_RHOPB
PilT protein-like protein; K07062
scnpilot_p_inoc_scaffold_239_curated_72
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

71990..72235
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S369_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH50455.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
scnpilot_p_inoc_scaffold_239_curated_73
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

72254..73975
DNA (1722bp) protein (574aa)
Resolvase domain-containing protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S3Y3_9SPHN
Resolvase domain-containing protein {ECO:0000313|EMBL:AGH50456.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
resolvase domain-containing protein
scnpilot_p_inoc_scaffold_239_curated_74
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(74370..74675)
DNA (306bp) protein (102aa)
DsrC-like protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U4T3_9PROT
DsrC-like protein {ECO:0000313|EMBL:CAM77890.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
sulfur relay protein, TusE/DsrC/DsvC family
scnpilot_p_inoc_scaffold_239_curated_75
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

74988..75737
DNA (750bp) protein (250aa)
Transcriptional activator n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4U4T5_9PROT
Putative transcriptional activator protein fnrA {ECO:0000313|EMBL:CDK99261.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; K13642 CRP/FNR family transcriptional regulator, transcriptional activator FtrB
scnpilot_p_inoc_scaffold_239_curated_76
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

75847..76293
DNA (447bp) protein (149aa)
Two-component response regulator n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4U4T6_9PROT
Signal transduction response regulator, receiver domain {ECO:0000313|EMBL:CDK99260.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
FOG: CheY-like receiver
scnpilot_p_inoc_scaffold_239_curated_77
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

76300..78783
DNA (2484bp) protein (828aa)
Two-component sensory box protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U4T7_9PROT
Two-component sensory box protein {ECO:0000313|EMBL:CAM77894.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
hypothetical protein
scnpilot_p_inoc_scaffold_239_curated_78
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

78780..79598
DNA (819bp) protein (273aa)
Putative fumarylacetoacetase, C-terminal-related {ECO:0000313|EMBL:CDK99258.1}; EC=3.-.-.- {ECO:0000313|EMBL:CDK99258.1};; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
5-carboxymethyl-2-hydroxymuconate Delta-isomerase (EC:5.3.3.10)
Putative fumarylacetoacetase, C-terminal-related n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F451_9PROT
scnpilot_p_inoc_scaffold_239_curated_79
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

79595..80461
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F1I4_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDK99257.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
conserved membrane protein of unknown function
scnpilot_p_inoc_scaffold_239_curated_80
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

80493..81245
DNA (753bp) protein (251aa)
Putative transcriptional regulator, GntR family n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F4M8_9PROT
Putative transcriptional regulator, GntR family {ECO:0000313|EMBL:CDK99256.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
transcriptional regulator
scnpilot_p_inoc_scaffold_239_curated_81
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

81359..82804
DNA (1446bp) protein (482aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504, ECO:0000313|EMBL:CDK99255.1}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504, ECO:0000313|EMBL:CDK99255.1};; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
pyruvate kinase (EC:2.7.1.40); K00873 pyruvate kinase [EC:2.7.1.40]
Pyruvate kinase n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F176_9PROT
scnpilot_p_inoc_scaffold_239_curated_82
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

82804..84201
DNA (1398bp) protein (466aa)
Sodium/solute symporter family protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U4U2_9PROT
Sodium/solute symporter family protein {ECO:0000313|EMBL:CAM77899.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
sodium/sulfate symporter
scnpilot_p_inoc_scaffold_239_curated_83
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(84250..85593)
DNA (1344bp) protein (448aa)
hypothetical protein id=1328169 bin=GWE1_T_denit_62_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_p_inoc_scaffold_239_curated_84
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(85710..85949)
DNA (240bp) protein (80aa)
Phosphoribosylformylglycinamidine synthase subunit PurS {ECO:0000256|HAMAP-Rule:MF_01926}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_01926};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_01926};; Formylglycinamide ribonucleotide amidotransferase subunit III {ECO:0000256|HAMAP-Rule:MF_01926}; Phosphoribosylformylglycinamidine synthase subunit III {ECO:0000256|HAMAP-Rule:MF_01926}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source
phosphoribosylformylglycinamidine synthase; K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
Phosphoribosylformylglycinamidine (FGAM) synthase n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4U4U3_9PROT
scnpilot_p_inoc_scaffold_239_curated_85
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(86108..86872)
DNA (765bp) protein (255aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6); K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4U4U4_9PROT
scnpilot_p_inoc_scaffold_239_curated_86
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(87017..89044)
DNA (2028bp) protein (676aa)
Methyl-accepting chemotaxis receptor/sensory transducer n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U4U5_9PROT
Methyl-accepting chemotaxis receptor/sensory transducer {ECO:0000313|EMBL:CAM77902.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
methyl-accepting chemotaxis protein
scnpilot_p_inoc_scaffold_239_curated_87
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(89128..89868)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F169_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDK99250.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
hypothetical protein
scnpilot_p_inoc_scaffold_239_curated_88
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

89989..90315
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F1B3_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDK99249.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
hypothetical protein
scnpilot_p_inoc_scaffold_239_curated_89
unknown

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comp(90412..91026)
DNA (615bp) protein (205aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_239_curated_90
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(91568..92902)
DNA (1335bp) protein (445aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172, ECO:0000313|EMBL:CDK99248.1};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
adenylosuccinate lyase (EC:4.3.2.2); K01756 adenylosuccinate lyase [EC:4.3.2.2]
Adenylosuccinate lyase n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4U4U8_9PROT
Displaying items 61-90 of 192 in total

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