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scnpilot_p_inoc_scaffold_239_curated_71

Organism: scnpilot_dereplicated_Magnetospirillum_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 71485..71907

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.1
  • Coverage: 139.0
  • Bit_score: 244
  • Evalue 1.00e-61
Ribonuclease VapC n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q20YW0_RHOPB similarity UNIREF
DB: UNIREF100
  • Identity: 83.2
  • Coverage: 137.0
  • Bit_score: 232
  • Evalue 3.70e-58
PilT protein-like protein; K07062 similarity KEGG
DB: KEGG
  • Identity: 83.2
  • Coverage: 137.0
  • Bit_score: 232
  • Evalue 1.10e-58

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Taxonomy

Novosphingobium resinovorum → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 423
ATGATCGTTCTCGACACCAACGTCATCTCCGAGCTGATGCGGCGCGAGCCTGACCCGAGGGTGATGGCGTGGATTGCCGAGCAGCCGATGGCCGGCGTGTTCACGACGACGCTGACGCAGGCGGAAATCTTCTACGGTCTGGCGCTGCTGCCAGAGGGACGCCGGCGCGACGATCTGCTGGCGGCCGCACGTCCGATGTTCGATGTCGATCTGGCGGGGCGTGTCCTGCCGTTCGATACCGACGCGGCGGTTGTCTATCCGGAGATCGCCGCCGGGCGGAAACAGGGTGGCAAGCCGATCAGCCAGATCGACGCGCAAATCGCCGCCATTGTCCGCTCGCGCGGCGCGCGGCTGGCGACTCGCAACGTCCGCGATTTCGCCGATTGCGGGATCACGGTCGTCGATCCGTGGGGCGAAGCATGA
PROTEIN sequence
Length: 141
MIVLDTNVISELMRREPDPRVMAWIAEQPMAGVFTTTLTQAEIFYGLALLPEGRRRDDLLAAARPMFDVDLAGRVLPFDTDAAVVYPEIAAGRKQGGKPISQIDAQIAAIVRSRGARLATRNVRDFADCGITVVDPWGEA*