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scnpilot_p_inoc_scaffold_4152_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_4152_curated_1
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2..199
-----------------
DNA (198bp)
protein (66aa)
hypothetical protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B62E47
Uncharacterized protein {ECO:0000313|EMBL:KJL39029.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein
scnpilot_p_inoc_scaffold_4152_curated_2
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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196..2007
-----------------
DNA (1812bp)
protein (604aa)
type VI secretion protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B5D895
Type IV secretory system Conjugative DNA transfer {ECO:0000313|EMBL:KJL39028.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein
scnpilot_p_inoc_scaffold_4152_curated_3
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(2019..2378)
-----------------
DNA (360bp)
protein (120aa)
Uncharacterized protein {ECO:0000313|EMBL:KJL39027.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein
scnpilot_p_inoc_scaffold_4152_curated_4
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(2492..3091)
-----------------
DNA (600bp)
protein (200aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
lipoprotein signal peptidase; K03101 signal peptidase II [EC:3.4.23.36]
Lipoprotein signal peptidase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KGY3_9MICO
scnpilot_p_inoc_scaffold_4152_curated_5
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3088..4989)
-----------------
DNA (1902bp)
protein (634aa)
Putative cadmium-transporting ATPase {ECO:0000313|EMBL:KJL39025.1}; EC=3.6.3.3 {ECO:0000313|EMBL:KJL39025.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
putative cadmium-transporting ATPase (EC:3.6.3.3)
ATPase P n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KJ08_9MICO
scnpilot_p_inoc_scaffold_4152_curated_6
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(4986..5360)
-----------------
DNA (375bp)
protein (125aa)
ArsR family transcriptional regulator n=1 Tax=Bifidobacterium minimum RepID=UPI0003B6DF13
HTH-type transcriptional regulator CmtR {ECO:0000313|EMBL:KJL39024.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
ctpR; ArsR DNA-binding transcription regulator
scnpilot_p_inoc_scaffold_4152_curated_7
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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5617..6057
-----------------
DNA (441bp)
protein (147aa)
single-stranded DNA-binding protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B59BFE
Single-stranded DNA-binding protein {ECO:0000313|EMBL:KJL39023.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
single-stranded DNA-binding protein
scnpilot_p_inoc_scaffold_4152_curated_8
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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6067..6681
-----------------
DNA (615bp)
protein (205aa)
hypothetical protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B43B1E
Uncharacterized protein {ECO:0000313|EMBL:KJL39022.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein
scnpilot_p_inoc_scaffold_4152_curated_9
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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6820..7344
-----------------
DNA (525bp)
protein (175aa)
hypothetical protein n=1 Tax=Leucobacter sp. UCD-THU RepID=UPI00037AF1CD
Uncharacterized protein {ECO:0000313|EMBL:KJL39021.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein
scnpilot_p_inoc_scaffold_4152_curated_10
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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7485..9215
-----------------
DNA (1731bp)
protein (577aa)
hypothetical protein n=1 Tax=Leucobacter sp. UCD-THU RepID=UPI0003772DFA
Uncharacterized protein {ECO:0000313|EMBL:KJL39020.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
putative helicase
Displaying 10 items

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