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scnpilot_p_inoc_scaffold_50_curated

Search features with annotation key words

Displaying items 1-30 of 388 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_50_curated_1
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..1579
DNA (1578bp) protein (526aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035E01A0
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA {ECO:0000313|EMBL:EPR75188.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
putative peptide ABC transporter substrate-binding protein
scnpilot_p_inoc_scaffold_50_curated_2
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1656..2594
DNA (939bp) protein (313aa)
ABC transporter permease n=1 Tax=Microbacterium sp. 292MF RepID=UPI000380960A
Putative ABC transporter, permease {ECO:0000313|EMBL:EAR25790.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
putative peptide ABC transporter permease; K02033 peptide/nickel transport system permease protein
scnpilot_p_inoc_scaffold_50_curated_3
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2591..3448
DNA (858bp) protein (286aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000361A12A
Putative ABC transporter, permease {ECO:0000313|EMBL:EAR25791.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
putative peptide ABC transporter permease; K02034 peptide/nickel transport system permease protein
scnpilot_p_inoc_scaffold_50_curated_4
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3445..5013
DNA (1569bp) protein (523aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003628808
Putative ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EAR25792.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
ABC transporter
scnpilot_p_inoc_scaffold_50_curated_5
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5015..6103
DNA (1089bp) protein (363aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000379F6AA
Uncharacterized protein {ECO:0000313|EMBL:EAR25793.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_50_curated_6
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6251..8638
DNA (2388bp) protein (796aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
uvrD; superfamily I DNA and RNA helicase; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12]
Superfamily I DNA and RNA helicase n=1 Tax=Microbacterium sp. TS-1 RepID=U2YZ87_9MICO
scnpilot_p_inoc_scaffold_50_curated_7
Georgenia sp. SUBG003, Georgenia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8764..10347
DNA (1584bp) protein (528aa)
YidE/YbjL duplication n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LRN7_9BURK
Transporter {ECO:0000313|EMBL:KEP23771.1}; TaxID=1497974 species="Bacteria; Actinobacteria; Micrococcales; Bogoriellaceae; Georgenia.;" source="Georgenia sp. SUBG003.;"
putative transport protein; K07085 putative transport protein
scnpilot_p_inoc_scaffold_50_curated_8
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10451..11533
DNA (1083bp) protein (361aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037FD2A1
signal transduction histidine kinase
Signal transduction histidine kinase {ECO:0000313|EMBL:BAJ73734.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_50_curated_9
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11505..12587
DNA (1083bp) protein (361aa)
eukaryotic-type DNA primase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
Eukaryotic-type DNA primase n=1 Tax=Microbacterium sp. TS-1 RepID=U2XCN7_9MICO
Eukaryotic-type DNA primase {ECO:0000313|EMBL:GAD35761.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
scnpilot_p_inoc_scaffold_50_curated_10
Gordonia sp. no. 9, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12584..13078
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Gordonia sihwensis NBRC 108236 RepID=L7LM80_9ACTO
Nitroreductase {ECO:0000313|EMBL:KJR07041.1}; TaxID=1617449 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia sp. no. 9.;"
hypothetical protein
scnpilot_p_inoc_scaffold_50_curated_11
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13095..14141)
DNA (1047bp) protein (349aa)
ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
ATP-dependent DNA ligase n=1 Tax=Microbacterium sp. B19 RepID=UPI000347E4F0
ATP-dependent DNA ligase {ECO:0000313|EMBL:BAJ73731.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_50_curated_12
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14188..15345)
DNA (1158bp) protein (386aa)
Putative permease n=1 Tax=Microbacterium sp. TS-1 RepID=U2XSD1_9MICO
Putative permease {ECO:0000313|EMBL:GAD35757.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
permease
scnpilot_p_inoc_scaffold_50_curated_13
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15443..16948)
DNA (1506bp) protein (502aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00035F50D0
Dehydrogenase {ECO:0000313|EMBL:EYT58296.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
putative dehydrogenase
scnpilot_p_inoc_scaffold_50_curated_14
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17246..18325
DNA (1080bp) protein (360aa)
choloylglycine hydrolase; K01442 choloylglycine hydrolase [EC:3.5.1.24]
Linear amide C-N hydrolase, choloylglycine hydrolase family protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2SP99_LEIAQ
Linear amide C-N hydrolase, choloylglycine hydrolase family protein {ECO:0000313|EMBL:ERK67233.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
scnpilot_p_inoc_scaffold_50_curated_15
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18407..19084)
DNA (678bp) protein (226aa)
Transcriptional regulator n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NDQ1_MICTS
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:BAJ73727.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_50_curated_16
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19294..22845
DNA (3552bp) protein (1184aa)
glycosyltransferase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B345CC
FHA domain-containing protein FhaA {ECO:0000313|EMBL:KJL39434.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein
scnpilot_p_inoc_scaffold_50_curated_17
Nesterenkonia sp. AN1, Nesterenkonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22839..24422
DNA (1584bp) protein (528aa)
chitinase (EC:3.2.1.14); K01183 chitinase [EC:3.2.1.14]
glycosyl hydrolase family 18 n=1 Tax=Microbacterium sp. B19 RepID=UPI00034501D6
Glycosyl hydrolase family 18 {ECO:0000313|EMBL:EXF25830.1}; TaxID=652017 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Nesterenkonia.;" source="Nesterenkonia sp. AN1.;"
scnpilot_p_inoc_scaffold_50_curated_18
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24539..25705
DNA (1167bp) protein (389aa)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
sucC; succinyl-CoA synthetase, beta subunit; K01903 succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
Succinyl-CoA ligase [ADP-forming] subunit beta n=2 Tax=Microbacterium RepID=H8E160_9MICO
scnpilot_p_inoc_scaffold_50_curated_19
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

25733..26635
DNA (903bp) protein (301aa)
sucD; succinyl-CoA synthetase, alpha subunit; K01902 succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KQP5_9MICO
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_p_inoc_scaffold_50_curated_20
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26704..27138
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00035FDCF0
Nitroreductase {ECO:0000313|EMBL:KDA06470.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
hypothetical protein
scnpilot_p_inoc_scaffold_50_curated_21
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27227..27796)
DNA (570bp) protein (190aa)
Flavin reductase-like domain-containing protein n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NEL4_MICTS
flavin reductase-like domain-containing protein
Flavin reductase-like domain-containing protein {ECO:0000313|EMBL:BAJ75099.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_50_curated_22
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27888..28877)
DNA (990bp) protein (330aa)
Monosaccharide-binding protein n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4EY69_MODMB
Uncharacterized protein {ECO:0000313|EMBL:KDA07209.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
monosaccharide-binding protein
scnpilot_p_inoc_scaffold_50_curated_23
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29112..29690)
DNA (579bp) protein (193aa)
Putative Transcriptional regulator, MarR family n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4EY75_MODMB
Putative Transcriptional regulator, MarR family {ECO:0000313|EMBL:CDJ98982.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
MarR family transcriptional regulator
scnpilot_p_inoc_scaffold_50_curated_24
Gordonia terrae, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29858..31237
DNA (1380bp) protein (460aa)
Putative FMNH2-dependent monooxygenase n=1 Tax=Gordonia terrae NBRC 100016 RepID=H5UDL2_9ACTO
Putative FMNH2-dependent monooxygenase {ECO:0000313|EMBL:GAB43820.1}; TaxID=1089454 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia terrae NBRC 100016.;"
putative monooxygenase
scnpilot_p_inoc_scaffold_50_curated_25

Not on your lists

31265..31837
DNA (573bp) protein (191aa)
fabG1; 3-oxoacyl-ACP reductase (EC:1.1.1.100)
hypothetical protein n=1 Tax=Longispora albida RepID=UPI00036E3EA9
Short-chain dehydrogenase {ECO:0000313|EMBL:ESS06432.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
scnpilot_p_inoc_scaffold_50_curated_26
Roseivivax atlanticus, Roseivivax, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31978..32763
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Roseovarius sp. 217 RepID=A3W7Y7_9RHOB
Short-chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:ETW10721.1}; TaxID=1317118 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseivivax.;" source="Roseivivax atlanticus.;"
LinC-like SDR-family protein
scnpilot_p_inoc_scaffold_50_curated_27
unknown

Not on your lists

32993..33532
DNA (540bp) protein (180aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_50_curated_28
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33529..35118
DNA (1590bp) protein (530aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00031E1FEF
Uncharacterized protein {ECO:0000313|EMBL:CDK00618.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
polysaccharide deacetylase
scnpilot_p_inoc_scaffold_50_curated_29
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35162..36418
DNA (1257bp) protein (419aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI00034DB4BC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEP75202.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
scnpilot_p_inoc_scaffold_50_curated_30
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36423..37007
DNA (585bp) protein (195aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
purN; folate-dependent phosphoribosylglycinamide formyltransferase PurN; K11175 phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
Folate-dependent phosphoribosylglycinamideformyltransferase PurN n=1 Tax=Microbacterium sp. TS-1 RepID=U2XSB4_9MICO
Displaying items 1-30 of 388 in total

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