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scnpilot_p_inoc_scaffold_886_curated

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_886_curated_1
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..900
DNA (900bp) protein (300aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036341BB
Competence protein ComM {ECO:0000313|EMBL:KJL35313.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
ATPase with chaperone activity; K07391 magnesium chelatase family protein
scnpilot_p_inoc_scaffold_886_curated_2
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1249..2865)
DNA (1617bp) protein (539aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035C11CD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGW41295.1}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
scnpilot_p_inoc_scaffold_886_curated_3
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3054..4409)
DNA (1356bp) protein (452aa)
hypothetical protein, partial n=1 Tax=Sphingobium chinhatense RepID=UPI000369FBEA
Uncharacterized protein {ECO:0000313|EMBL:KEO98544.1}; TaxID=39960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter litoralis.;"
hypothetical protein
scnpilot_p_inoc_scaffold_886_curated_4
unknown

Not on your lists

comp(4582..4893)
DNA (312bp) protein (104aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_886_curated_5
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5028..5285)
DNA (258bp) protein (86aa)
Uncharacterized protein {ECO:0000313|EMBL:KJQ54153.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
scnpilot_p_inoc_scaffold_886_curated_6
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5282..5875)
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Curtobacterium flaccumfaciens RepID=UPI000368A60E
Uncharacterized protein {ECO:0000313|EMBL:CKI51697.1}; TaxID=1772 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis.;"
hypothetical protein
scnpilot_p_inoc_scaffold_886_curated_7
unknown

Not on your lists

comp(5950..6267)
DNA (318bp) protein (106aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_886_curated_8
Terrabacter sp. 28, Terrabacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6264..6458)
DNA (195bp) protein (65aa)
Uncharacterized protein {ECO:0000313|EMBL:KJK10790.1}; TaxID=1619947 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Terrabacter.;" source="Terrabacter sp. 28.;"
scnpilot_p_inoc_scaffold_886_curated_9
unknown

Not on your lists

comp(6573..6836)
DNA (264bp) protein (88aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_886_curated_10
unknown

Not on your lists

comp(6956..7240)
DNA (285bp) protein (95aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_886_curated_11
Leucobacter komagatae, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7532..8884)
DNA (1353bp) protein (451aa)
hypothetical protein n=1 Tax=Rhodococcus sp. 114MFTsu3.1 RepID=UPI0003744BBD
Leucobacter komagatae strain VKM ST2845 L_komagatae_01, whole genome shotgun sequence {ECO:0000313|EMBL:KIP53795.1}; TaxID=55969 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter komagatae.;"
site-specific recombinase, DNA invertase Pin
scnpilot_p_inoc_scaffold_886_curated_12
unknown

Not on your lists

8935..9039
DNA (105bp) protein (35aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_886_curated_13
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9036..10205
DNA (1170bp) protein (390aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002D6B8E8
Uncharacterized protein {ECO:0000313|EMBL:CDK00961.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
Rossmann fold nucleotide-binding protein; K04096 DNA processing protein
scnpilot_p_inoc_scaffold_886_curated_14
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10235..10762
DNA (528bp) protein (176aa)
hypothetical protein n=1 Tax=Pseudoclavibacter faecalis RepID=UPI00036BAB05
Uncharacterized protein {ECO:0000313|EMBL:EZP28198.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
hypothetical protein
scnpilot_p_inoc_scaffold_886_curated_15
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10839..11738
DNA (900bp) protein (300aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000361A088
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
integrase; K03733 integrase/recombinase XerC
scnpilot_p_inoc_scaffold_886_curated_16
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11799..12374
DNA (576bp) protein (192aa)
Uncharacterized protein {ECO:0000313|EMBL:KIC56144.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
scnpilot_p_inoc_scaffold_886_curated_17
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12405..12818)
DNA (414bp) protein (138aa)
peptidase M23 n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B38038
Peptidase family M23 {ECO:0000313|EMBL:KJL31893.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
scnpilot_p_inoc_scaffold_886_curated_18
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


13288..14172
DNA (885bp) protein (295aa)
30S ribosomal protein S2 n=1 Tax=Microbacterium yannicii RepID=UPI0002EFD090
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
rpsB; ribosomal protein S2; K02967 small subunit ribosomal protein S2
scnpilot_p_inoc_scaffold_886_curated_19
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14254..15081
DNA (828bp) protein (276aa)
elongation factor Ts n=1 Tax=Microbacterium sp. B19 RepID=UPI00034BE737
tsf; translation elongation factor Ts; K02357 elongation factor Ts
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
scnpilot_p_inoc_scaffold_886_curated_20
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15168..15890
DNA (723bp) protein (241aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
pyrH; uridylate kinase; K09903 uridylate kinase [EC:2.7.4.22]
Uridylate kinase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3B3K5_9MICO
scnpilot_p_inoc_scaffold_886_curated_21
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15938..16492
DNA (555bp) protein (185aa)
ribosome recycling factor n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036CB652
frr; ribosome recycling factor; K02838 ribosome recycling factor
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_886_curated_22
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16501..17508
DNA (1008bp) protein (336aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
CDP-diglyceride synthetase; K00981 phosphatidate cytidylyltransferase [EC:2.7.7.41]
CDP-diglyceride synthetase n=1 Tax=Microbacterium sp. B19 RepID=UPI000349DA52
scnpilot_p_inoc_scaffold_886_curated_23
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17540..18136
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0003117FEB
Permease of the major facilitator superfamily {ECO:0000313|EMBL:GAD33058.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
permease of the major facilitator superfamily
scnpilot_p_inoc_scaffold_886_curated_24
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18319..18882
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KFY4_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EQM74389.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
hypothetical protein
scnpilot_p_inoc_scaffold_886_curated_25
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19178..19906
DNA (729bp) protein (243aa)
alpha/beta hydrolase n=1 Tax=Microbacterium yannicii RepID=UPI000311F26D
hydrolase of the alpha/beta superfamily; K07018
Predicted hydrolase of the alpha/beta superfamily {ECO:0000313|EMBL:BAJ76246.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_886_curated_26
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19910..20974)
DNA (1065bp) protein (355aa)
permease n=1 Tax=Microbacterium yannicii RepID=UPI0002F8054F
Contig_2, whole genome shotgun sequence {ECO:0000313|EMBL:KIP95472.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
permease
scnpilot_p_inoc_scaffold_886_curated_27
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21142..23013
DNA (1872bp) protein (624aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002D44DEE
glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:BAJ76248.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_886_curated_28
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23010..23957
DNA (948bp) protein (316aa)
thioredoxin n=1 Tax=Microbacterium yannicii RepID=UPI0003050DE5
thioredoxin domain-containing protein; K05838 putative thioredoxin
Thioredoxin domain-containing protein {ECO:0000313|EMBL:BAJ76249.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_886_curated_29
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23981..26149)
DNA (2169bp) protein (723aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
1,4-alpha-glucan branching enzyme; K00700 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
glycogen branching protein n=1 Tax=Microbacterium yannicii RepID=UPI0002D63617
scnpilot_p_inoc_scaffold_886_curated_30
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26146..28107)
DNA (1962bp) protein (654aa)
Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase {ECO:0000256|HAMAP-Rule:MF_02124}; Short=GMPMT {ECO:0000256|HAMAP-Rule:MF_02124};; EC=2.4.99.16 {ECO:0000256|HAMAP-Rule:MF_02124};; (1->4)-alpha-D-glucan:maltose-1-phosphate alpha-D-maltosyltransferase {ECO:0000256|HAMAP-Rule:MF_02124}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037943B6
glycosidase
Displaying items 1-30 of 36 in total

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