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scnpilot_p_inoc_scaffold_2088_curated

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2088_curated_1
unknown

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3..68
DNA (66bp) protein (22aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_2088_curated_2
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(65..1372)
DNA (1308bp) protein (436aa)
HNH endonuclease n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E107_9MICO
HNH endonuclease {ECO:0000313|EMBL:EIC09408.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2088_curated_3
Arthrobacter sp. 11W110_air, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1450..2598
DNA (1149bp) protein (383aa)
hypothetical protein n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B7B14B
Uncharacterized protein {ECO:0000313|EMBL:CEA07148.1}; TaxID=1461584 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. 11W110_air.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2088_curated_4
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(2619..5123)
DNA (2505bp) protein (835aa)
glucan phosphorylase; K00688 starch phosphorylase [EC:2.4.1.1]
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
glycogen phosphorylase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034C5EAE
scnpilot_p_inoc_scaffold_2088_curated_5
Leucobacter sp. UCD-THU, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(5223..6302)
DNA (1080bp) protein (360aa)
hypothetical protein n=1 Tax=Kocuria rhizophila RepID=UPI0002F16A3A
Uncharacterized protein {ECO:0000313|EMBL:EYT54584.1}; TaxID=1292023 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter sp. UCD-THU.;"
cobalamin synthesis protein CobW
scnpilot_p_inoc_scaffold_2088_curated_6
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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6351..6473
DNA (123bp) protein (41aa)
50S ribosomal protein L36 n=1 Tax=Microbacterium sp. TS-1 RepID=U2XKS4_9MICO
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
50S ribosomal protein L36
scnpilot_p_inoc_scaffold_2088_curated_7
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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6482..7600
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XS35_MICPN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK37248.1}; TaxID=1032480 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
scnpilot_p_inoc_scaffold_2088_curated_8
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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7594..8577
DNA (984bp) protein (328aa)
Putative transporter n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XS36_MICPN
Sodium Bile acid symporter family protein {ECO:0000313|EMBL:KJQ54845.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
putative transporter
scnpilot_p_inoc_scaffold_2088_curated_9
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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8574..9305
DNA (732bp) protein (244aa)
Glutamine amidotransferase {ECO:0000313|EMBL:KHK99178.1}; EC=6.3.5.2 {ECO:0000313|EMBL:KHK99178.1};; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
GMP synthase - glutamine amidotransferase domain; K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00031DAC84
scnpilot_p_inoc_scaffold_2088_curated_10
Arthrobacter sp. Rue61a, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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9405..9962
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Arthrobacter sp. Rue61a RepID=J7LRJ9_9MICC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFR28037.1}; TaxID=1118963 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. Rue61a.;"
scnpilot_p_inoc_scaffold_2088_curated_11
unknown

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9962..10273
DNA (312bp) protein (104aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_2088_curated_12
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(10441..11121)
DNA (681bp) protein (227aa)
Regulatory protein GntR HTH n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E193_9MICO
Transcriptional regulator {ECO:0000313|EMBL:KJC65068.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
GntR family transcriptional regulator
scnpilot_p_inoc_scaffold_2088_curated_13
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11102..12010)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AEW9_9MICO
Multidrug transporter {ECO:0000313|EMBL:KJC65069.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
permease of the drug/metabolite transporter (DMT) superfamily; K03298 drug/metabolite transporter, DME family
scnpilot_p_inoc_scaffold_2088_curated_14
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(12086..13846)
DNA (1761bp) protein (587aa)
Putative signal transduction histidine kinase n=1 Tax=Microbacterium sp. TS-1 RepID=U2YX34_9MICO
Putative signal transduction histidine kinase {ECO:0000313|EMBL:GAD35108.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
scnpilot_p_inoc_scaffold_2088_curated_15
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(13902..14315)
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Microbacterium paraoxydans RepID=UPI0003762AE7
GDP-D-mannose dehydratase {ECO:0000313|EMBL:EZP29408.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
hypothetical protein
Displaying 15 items

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