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scnpilot_p_inoc_scaffold_158_curated

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Displaying items 1-30 of 192 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_158_curated_1
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37..297)
DNA (261bp) protein (87aa)
Putative polyamine ABC transporter permease protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AII7_9ACTN
Spermidine/putrescine transport system permease protein PotB {ECO:0000313|EMBL:KJL35630.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
scnpilot_p_inoc_scaffold_158_curated_2
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(300..1445)
DNA (1146bp) protein (382aa)
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00083160}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00083160};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
spermidine/putrescine ABC transporter ATPase; K11072 spermidine/putrescine transport system ATP-binding protein [EC:3.6.3.31] id=7719314 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
spermidine/putrescine ABC transporter ATPase; K11072 spermidine/putrescine transport system ATP-binding protein [EC:3.6.3.31]
scnpilot_p_inoc_scaffold_158_curated_3
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1452..2693)
DNA (1242bp) protein (414aa)
polyamine ABC transporter substrate-binding lipoprotein n=1 Tax=Glaciibacter superstes RepID=UPI0003B6D848
Spermidine/putrescine-binding periplasmic protein {ECO:0000313|EMBL:KJL35628.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
polyamine ABC transporter substrate-binding protein; K11069 spermidine/putrescine transport system substrate-binding protein
scnpilot_p_inoc_scaffold_158_curated_4
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2898..4286)
DNA (1389bp) protein (463aa)
hypothetical protein n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI00028A09B9
Contig_8, whole genome shotgun sequence {ECO:0000313|EMBL:KIP94023.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
hypothetical protein
scnpilot_p_inoc_scaffold_158_curated_5
Mycobacterium sp. KMS, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4345..4818)
DNA (474bp) protein (158aa)
Transcriptional regulator, AsnC family n=3 Tax=Mycobacterium RepID=A1UC90_MYCSK
AsnC family transcriptional regulator; K03718 Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:ABL90448.1}; TaxID=189918 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium sp. (strain KMS).;"
scnpilot_p_inoc_scaffold_158_curated_6

Not on your lists

4987..5547
DNA (561bp) protein (187aa)
Bacterial regulatory protein, tetR family n=1 Tax=uncultured organism RepID=T1W5N9_9ZZZZ
Bacterial regulatory protein, tetR family {ECO:0000313|EMBL:AGU10312.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
putative TetR-family transcriptional regulator
scnpilot_p_inoc_scaffold_158_curated_7
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5549..6607)
DNA (1059bp) protein (353aa)
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:CDK01784.1}; EC=1.1.1.100 {ECO:0000313|EMBL:CDK01784.1};; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
short-chain dehydrogenase n=1 Tax=Agromyces subbeticus RepID=UPI0003B6F0F0
putative short-chain dehydrogenase
scnpilot_p_inoc_scaffold_158_curated_8
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6795..7823
DNA (1029bp) protein (343aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036179AD
Periplasmic binding protein {ECO:0000313|EMBL:CDJ98861.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
Fe3+-hydroxamate ABC transporter periplasmic protein; K02016 iron complex transport system substrate-binding protein
scnpilot_p_inoc_scaffold_158_curated_9
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7820..8866
DNA (1047bp) protein (349aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003783598
Iron-enterobactin transporter subunit membrane component of ABC superfamily {ECO:0000313|EMBL:CDJ98862.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
fhuB; iron(3+)-hydroxamate import system permease protein FhuB
scnpilot_p_inoc_scaffold_158_curated_10
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

8863..9933
DNA (1071bp) protein (357aa)
ABC transporter permease n=1 Tax=Microbacterium maritypicum MF109 RepID=T5L334_9MICO
putative FecCD-family membrane transport protein; K02015 iron complex transport system permease protein
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_p_inoc_scaffold_158_curated_11
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9930..10829
DNA (900bp) protein (300aa)
Iron-dicitrate ABC transporter ATP-binding protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5L528_9MICO
Iron-dicitrate ABC transporter ATP-binding protein {ECO:0000313|EMBL:EQM85680.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
cbrD; achromobactin ABC transporter, ATP-binding protein CbrD
scnpilot_p_inoc_scaffold_158_curated_12
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10816..11760
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002F29B69
Siderophore-interacting protein {ECO:0000313|EMBL:KDA04701.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
hypothetical protein
scnpilot_p_inoc_scaffold_158_curated_13
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11818..12036
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5K2K7_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KJL27169.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
scnpilot_p_inoc_scaffold_158_curated_14
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12033..12437
DNA (405bp) protein (135aa)
Ribonuclease VapC n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KC68_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KJL27168.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
scnpilot_p_inoc_scaffold_158_curated_15
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12482..12967)
DNA (486bp) protein (162aa)
glutathione peroxidase; K00432 glutathione peroxidase [EC:1.11.1.9]
glutathione peroxidase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034B64EA
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
scnpilot_p_inoc_scaffold_158_curated_16
Jonesia denitrificans, Jonesia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12991..13434)
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003612391
transcriptional regulator, MarR family
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ACV08805.1}; TaxID=471856 species="Bacteria; Actinobacteria; Micrococcales; Jonesiaceae; Jonesia.;" source="Jonesia denitrificans (strain ATCC 14870 / DSM 20603 / CIP 55134); (Listeria denitrificans).;"
scnpilot_p_inoc_scaffold_158_curated_17
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

13952..18034
DNA (4083bp) protein (1361aa)
hypothetical protein
Putative uncharacterized protein id=4578308 bin=GWF2_Lentisphaerae_57_35 species=Syntrophobotulus glycolicus genus=Syntrophobotulus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
Tax=GWF2_Lentisphaerae_57_35_curated
scnpilot_p_inoc_scaffold_158_curated_18
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18251..18868)
DNA (618bp) protein (206aa)
Bifunctional deaminase-reductase domain-containing protein n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FGC5_VERMA
Dihydrofolate reductase {ECO:0000313|EMBL:EXG82597.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
bifunctional deaminase-reductase domain-containing protein
scnpilot_p_inoc_scaffold_158_curated_19
BJP_IG2069_Syntrophobacterales_46_30, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19011..19982
DNA (972bp) protein (324aa)
Uncharacterized protein n=2 Tax=Cyanothece RepID=B1WTV5_CYAA5
hypothetical protein
Tax=BJP_IG2069_Syntrophobacterales_46_30
scnpilot_p_inoc_scaffold_158_curated_20
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20261..20833
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003775D78
Contig_38, whole genome shotgun sequence {ECO:0000313|EMBL:KIU02845.1}; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium sp. MEB024.;"
hypothetical protein
scnpilot_p_inoc_scaffold_158_curated_21
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20902..21165
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Leifsonia rubra CMS 76R RepID=S7W1M9_9MICO
CopG family transcriptional regulator {ECO:0000313|EMBL:KHK97793.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
hypothetical protein
scnpilot_p_inoc_scaffold_158_curated_22
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21162..21401
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Leifsonia rubra CMS 76R RepID=S7W480_9MICO
Uncharacterized protein {ECO:0000313|EMBL:CDJ99799.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
putative toxin-antitoxin system, toxin component
scnpilot_p_inoc_scaffold_158_curated_23
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21404..22090)
DNA (687bp) protein (229aa)
polyketide cyclase n=1 Tax=Curtobacterium RepID=UPI0003B37DF9
Uncharacterized protein {ECO:0000313|EMBL:KDP91046.1}; TaxID=1291006 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter cf. michiganensis LMG 26808.;"
hypothetical protein
scnpilot_p_inoc_scaffold_158_curated_24
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22236..24935
DNA (2700bp) protein (900aa)
iron-containing alcohol dehydrogenase; K04072 acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
Iron-containing alcohol dehydrogenase n=2 Tax=Microbacterium RepID=H8E2H6_9MICO
Aldehyde-alcohol dehydrogenase {ECO:0000256|PIRNR:PIRNR000111}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
scnpilot_p_inoc_scaffold_158_curated_25
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25020..26489)
DNA (1470bp) protein (490aa)
hypothetical protein n=1 Tax=Brevibacterium linens RepID=UPI0000510017
Uncharacterized protein {ECO:0000313|EMBL:KGH43228.1}; TaxID=1522368 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
hypothetical protein
scnpilot_p_inoc_scaffold_158_curated_26
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26607..27278)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X7L0_NAKMY
Uncharacterized protein {ECO:0000313|EMBL:KHK98030.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
hypothetical protein
scnpilot_p_inoc_scaffold_158_curated_27
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27317..28225)
DNA (909bp) protein (303aa)
hypothetical protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B5E6FE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCE74076.1}; TaxID=1097677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. nebraskensis NCPPB 2581.;"
scnpilot_p_inoc_scaffold_158_curated_28
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28341..29951
DNA (1611bp) protein (537aa)
two-component sensor id=7720210 bin=CNBR_ACT species=Clavibacter michiganensis genus=Clavibacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
two-component system, histidine kinase
Two-component system, histidine kinase {ECO:0000313|EMBL:CCE74075.1}; TaxID=1097677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. nebraskensis NCPPB 2581.;"
scnpilot_p_inoc_scaffold_158_curated_29
Streptomyces avermitilis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29948..30577
DNA (630bp) protein (210aa)
LuxR response regulator receiver id=7720209 bin=CNBR_ACT species=Clavibacter michiganensis genus=Clavibacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
two-component system response regulator
Putative two-component system response regulator {ECO:0000313|EMBL:BAC72087.1}; TaxID=227882 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 /; NCIMB 12804 / NRRL 8165 / MA-4680).;"
scnpilot_p_inoc_scaffold_158_curated_30
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(30911..32524)
DNA (1614bp) protein (538aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KEW9_9MICO
acyl-CoA dehydrogenase domain-containing protein; K09456 putative acyl-CoA dehydrogenase
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
Displaying items 1-30 of 192 in total

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