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scnpilot_p_inoc_scaffold_110_curated_27

Organism: scnpilot_dereplicated_Microbacterium_6

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 21613..21900

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Microbacterium yannicii RepID=UPI0002DDD369 similarity UNIREF
DB: UNIREF100
  • Identity: 88.4
  • Coverage: 95.0
  • Bit_score: 165
  • Evalue 2.90e-38
hup; bacterial nucleoid DNA-binding protein; K03530 DNA-binding protein HU-beta similarity KEGG
DB: KEGG
  • Identity: 86.3
  • Coverage: 95.0
  • Bit_score: 163
  • Evalue 4.50e-38
DNA-binding protein HU {ECO:0000313|EMBL:KJL22783.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.4
  • Coverage: 95.0
  • Bit_score: 163
  • Evalue 1.50e-37

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Taxonomy

Microbacterium azadirachtae → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 288
ATGGCTGAAAAGTCCATCACCAAGACCGAGCTCGTCGCGAGCATCGCAAGCGCAACCGGTCAGAGCCAGGCCACCGTTTCGGGCGTCGTCGACGCGCTGTTCACCACTGTCGCCGAGGCCGTCGCCAAGGGCAGCAAGGTGTCGATCCCGGGCTGGGTCTCGTTCGAGCAGGTCGCCACCTCCGCTCGCACGGGCCGCAACCCGCAGACCGGCGAAGAGATCAAGATCCCCGCCGGCAAGCGCGTCAAGGTCTCGGCTGGCGCCAAGCTCAAGGCTGCCGCCAAGTAA
PROTEIN sequence
Length: 96
MAEKSITKTELVASIASATGQSQATVSGVVDALFTTVAEAVAKGSKVSIPGWVSFEQVATSARTGRNPQTGEEIKIPAGKRVKVSAGAKLKAAAK*