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scnpilot_p_inoc_scaffold_110_curated

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Displaying items 1-30 of 325 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_110_curated_1
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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170..928
DNA (759bp) protein (253aa)
dienelactone hydrolase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034C6760
Dienelactone hydrolase family protein {ECO:0000313|EMBL:KJL37200.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
dienelactone hydrolase
scnpilot_p_inoc_scaffold_110_curated_2
Propionibacterium freudenreichii, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(940..1377)
DNA (438bp) protein (146aa)
Hypothetical secreted protein n=1 Tax=Propionibacterium freudenreichii subsp. shermanii (strain ATCC 9614 / CIP 103027 / CIRM-BIA1) RepID=D7GHZ4_PROFC
Hypothetical secreted protein {ECO:0000313|EMBL:CDP48108.1}; TaxID=66712 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium freudenreichii subsp. freudenreichii.;"
hypothetical protein
scnpilot_p_inoc_scaffold_110_curated_3
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1497..1958)
DNA (462bp) protein (154aa)
Predicted acyltransferase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NFY5_MICTS
acyltransferase
Predicted acyltransferase {ECO:0000313|EMBL:BAJ75248.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_110_curated_4
Brachybacterium phenoliresistens, Brachybacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2024..3019
DNA (996bp) protein (332aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00031AF7F0
Aldo/keto reductase {ECO:0000313|EMBL:EWS80665.1}; TaxID=396014 species="Bacteria; Actinobacteria; Micrococcales; Dermabacteraceae; Brachybacterium.;" source="Brachybacterium phenoliresistens.;"
oxidoreductase
scnpilot_p_inoc_scaffold_110_curated_5
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3110..3763
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A5S6_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD84453.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
scnpilot_p_inoc_scaffold_110_curated_6
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3760..4113
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI00034CDFEE
amino acid transporters
Amino acid transporters {ECO:0000313|EMBL:BAJ74614.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_110_curated_7
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4128..5537)
DNA (1410bp) protein (470aa)
purB; adenylosuccinate lyase; K01756 adenylosuccinate lyase [EC:4.3.2.2]
Adenylosuccinate lyase n=1 Tax=Microbacterium sp. TS-1 RepID=U2XAQ0_9MICO
Adenylosuccinate lyase {ECO:0000313|EMBL:GAD34706.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
scnpilot_p_inoc_scaffold_110_curated_8
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5593..6135)
DNA (543bp) protein (181aa)
ptpA; protein-tyrosine-phosphatase; K01104 protein-tyrosine phosphatase [EC:3.1.3.48]
protein-tyrosine-phosphatase n=1 Tax=Microbacterium yannicii RepID=UPI0002F423B2
Protein-tyrosine phosphatase, low molecular weight {ECO:0000313|EMBL:EIC07385.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
scnpilot_p_inoc_scaffold_110_curated_9
unknown

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6236..6523
DNA (288bp) protein (96aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_110_curated_10
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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6520..7923
DNA (1404bp) protein (468aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000377B0A9
Uncharacterized protein {ECO:0000313|EMBL:CDK00387.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein
scnpilot_p_inoc_scaffold_110_curated_11
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7934..8329)
DNA (396bp) protein (132aa)
membrane protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003812514
Uncharacterized protein {ECO:0000313|EMBL:KJL37191.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein; K08972 putative membrane protein
scnpilot_p_inoc_scaffold_110_curated_12
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8420..9523
DNA (1104bp) protein (368aa)
Putative phenylalanine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01513}; EC=2.6.1.- {ECO:0000256|HAMAP-Rule:MF_01513};; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
hisC2; histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9]
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000381A7A0
scnpilot_p_inoc_scaffold_110_curated_13
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9534..10664
DNA (1131bp) protein (377aa)
pdhA; pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit; K00161 pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
Dehydrogenase E1 component n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E6V4_9MICO
Dehydrogenase E1 component {ECO:0000313|EMBL:EIC07390.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
scnpilot_p_inoc_scaffold_110_curated_14
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10661..11692
DNA (1032bp) protein (344aa)
3-methyl-2-oxobutanoate dehydrogenase subunit beta {ECO:0000313|EMBL:KJL37188.1}; EC=1.2.4.4 {ECO:0000313|EMBL:KJL37188.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
pdhB; pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit; K00162 pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
2-oxoisovalerate dehydrogenase subunit beta n=1 Tax=Microbacterium sp. B19 RepID=UPI00034B0DE0
scnpilot_p_inoc_scaffold_110_curated_15
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11712..13094
DNA (1383bp) protein (461aa)
Dihydrolipoyllysine-residue acyltransferase component of branched-chain alpha-ketoacid dehydrogenase complex {ECO:0000313|EMBL:KJL37187.1}; EC=2.3.1.168 {ECO:0000313|EMBL:KJL37187.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
pdhC; pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component; K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12]
branched-chain alpha-keto acid dehydrogenase subunit E2 n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036AA17F
scnpilot_p_inoc_scaffold_110_curated_16
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13146..14156
DNA (1011bp) protein (337aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00030AFC2F
ABC-type metal ion transport system,periplasmic component/surface adhesin {ECO:0000313|EMBL:CDK00103.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
metal ABC transporter periplasmic protein; K02077 zinc/manganese transport system substrate-binding protein
scnpilot_p_inoc_scaffold_110_curated_17
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14153..15001
DNA (849bp) protein (283aa)
Sulfate/thiosulfate import ATP-binding protein CysA {ECO:0000313|EMBL:KJL37181.1}; EC=3.6.3.25 {ECO:0000313|EMBL:KJL37181.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
ABC transporter ATP-binding protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000382524B
fhuC; Mn/Zn ABC transporter ATPase; K02074 zinc/manganese transport system ATP-binding protein
scnpilot_p_inoc_scaffold_110_curated_18
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14998..15864
DNA (867bp) protein (289aa)
ABC transporter permease n=1 Tax=Microbacterium yannicii RepID=UPI00031DDD94
ABC-type Mn2+/Zn2+ transport systems, permease components {ECO:0000313|EMBL:CDK00101.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
znuB; Mn/Zn ABC transporter permease; K02075 zinc/manganese transport system permease protein
scnpilot_p_inoc_scaffold_110_curated_19
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15919..16344
DNA (426bp) protein (142aa)
peptide ABC transporter substrate-binding protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003677DB9
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:KHK95818.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
fur; Fe2+/Zn2+ uptake regulation proteins; K03711 Fur family transcriptional regulator, ferric uptake regulator
scnpilot_p_inoc_scaffold_110_curated_20
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16325..17368
DNA (1044bp) protein (348aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0003651D86
permease; K07089
Predicted permease {ECO:0000313|EMBL:BAJ74645.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_110_curated_21
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17361..18179
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI000315B12C
hypothetical protein
Predicted membrane protein {ECO:0000313|EMBL:BAJ74646.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_110_curated_22
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18169..19623
DNA (1455bp) protein (485aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037CB8EC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ74647.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_110_curated_23
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19623..20318
DNA (696bp) protein (232aa)
Putative 3-methyladenine DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097343}; EC=3.2.2.- {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097340};; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
3-methyladenine DNA glycosylase; K03652 DNA-3-methyladenine glycosylase [EC:3.2.2.21]
3-methyladenine DNA glycosylase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034DCBF3
scnpilot_p_inoc_scaffold_110_curated_24
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


20460..20696
DNA (237bp) protein (79aa)
50S ribosomal protein L28 n=3 Tax=Microbacterium RepID=H8E6X0_9MICO
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
rpmB; ribosomal protein L28; K02902 large subunit ribosomal protein L28
scnpilot_p_inoc_scaffold_110_curated_25
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


20696..20866
DNA (171bp) protein (57aa)
50S ribosomal protein L33 n=3 Tax=Microbacterium RepID=H8E6X1_9MICO
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
rpmG; ribosomal protein L33; K02913 large subunit ribosomal protein L33
scnpilot_p_inoc_scaffold_110_curated_26
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


20869..21174
DNA (306bp) protein (102aa)
30S ribosomal protein S14 n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035F7FE7
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
rpsN; ribosomal protein S14; K02954 small subunit ribosomal protein S14
scnpilot_p_inoc_scaffold_110_curated_27
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21613..21900
DNA (288bp) protein (96aa)
transcriptional regulator n=1 Tax=Microbacterium yannicii RepID=UPI0002DDD369
hup; bacterial nucleoid DNA-binding protein; K03530 DNA-binding protein HU-beta
DNA-binding protein HU {ECO:0000313|EMBL:KJL22783.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
scnpilot_p_inoc_scaffold_110_curated_28
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21975..23951
DNA (1977bp) protein (659aa)
copper transporter n=1 Tax=Microbacterium sp. 292MF RepID=UPI000374E3EA
Cytochrome c oxidase caa3 assembly factor (Caa3-CtaG) {ECO:0000313|EMBL:KJL42778.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein; K02351 putative membrane protein; K07245 putative copper resistance protein D
scnpilot_p_inoc_scaffold_110_curated_29
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23965..25071)
DNA (1107bp) protein (369aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI000316A6E2
Uncharacterized protein {ECO:0000313|EMBL:KJL25071.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
hypothetical protein
scnpilot_p_inoc_scaffold_110_curated_30
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25158..26534
DNA (1377bp) protein (459aa)
helicase n=1 Tax=Microbacterium yannicii RepID=UPI0002D5E927
ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member
ATP-dependent exoDNAse (Exonuclease V), alpha subunit-helicase superfamily I member {ECO:0000313|EMBL:BAJ74659.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
Displaying items 1-30 of 325 in total

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