ggKbase home page

scnpilot_p_inoc_scaffold_0_curated

Search features with annotation key words

Displaying items 181-210 of 1693 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_0_curated_181
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(195239..197248)
DNA (2010bp) protein (670aa)
thrS; threonyl-tRNA synthetase; K01868 threonyl-tRNA synthetase [EC:6.1.1.3]
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
threonyl-tRNA synthetase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003471FB6
scnpilot_p_inoc_scaffold_0_curated_182
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

197330..198478
DNA (1149bp) protein (383aa)
arsenic transporter n=1 Tax=Microbacterium sp. B19 RepID=UPI00034C3920
Na+/H+ antiporter NhaD
Arsenical pump membrane protein {ECO:0000256|RuleBase:RU004993}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_0_curated_183
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(198498..198881)
DNA (384bp) protein (128aa)
ATP-dependent DNA ligase n=1 Tax=Microbacterium sp. B19 RepID=UPI000348B73A
transcription-repair coupling factor
Transcription-repair coupling factor {ECO:0000313|EMBL:BAJ76456.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_0_curated_184
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(199053..199466)
DNA (414bp) protein (138aa)
pyridoxamine 5-phosphate oxidase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034B4002
flavin-nucleotide-binding protein structurally; K07006
Predicted flavin-nucleotide-binding protein structurally {ECO:0000313|EMBL:BAJ76455.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_0_curated_185
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

199629..199985
DNA (357bp) protein (119aa)
alternative tryptophan synthase beta-subunit n=1 Tax=Microbacterium sp. B19 RepID=UPI00034504CF
Uncharacterized protein {ECO:0000313|EMBL:KEP75417.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
scnpilot_p_inoc_scaffold_0_curated_186
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

200729..201082
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037B271D
Uncharacterized protein {ECO:0000313|EMBL:AJW79400.1}; TaxID=33014 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. insidiosus.;"
scnpilot_p_inoc_scaffold_0_curated_187
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(201183..201722)
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI00034DB22B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ76452.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_0_curated_188
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(201819..203090)
DNA (1272bp) protein (424aa)
Ammonia permease n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NFG9_MICTS
ammonia permease; K03320 ammonium transporter, Amt family
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_0_curated_189
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(203259..204296)
DNA (1038bp) protein (346aa)
Predicted ATPase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NFG8_MICTS
ATPase {ECO:0000313|EMBL:KEP75763.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
ATPase; K06916
scnpilot_p_inoc_scaffold_0_curated_190
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

204415..205317
DNA (903bp) protein (301aa)
thtR; rhodanese-related sulfurtransferase; K01011 thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
thiosulfate sulfurtransferase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003451976
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_0_curated_191
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

205352..205792
DNA (441bp) protein (147aa)
cysteine desufuration protein SufE n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B3E98D
SufE protein probably; K02426 cysteine desulfuration protein SufE
SufE protein probably {ECO:0000313|EMBL:BAJ76448.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_0_curated_192
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(205797..207005)
DNA (1209bp) protein (403aa)
alpha/beta hydrolase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034BD361
Alpha/beta hydrolase {ECO:0000313|EMBL:KEP75760.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
hydrolase of the alpha/beta superfamily
scnpilot_p_inoc_scaffold_0_curated_193
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

207025..207621
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI0003450DA2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ76445.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_0_curated_194
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

207614..208810
DNA (1197bp) protein (399aa)
ribonuclease D; K03684 ribonuclease D [EC:3.1.13.5]
Ribonuclease D n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NF01_MICTS
Ribonuclease D {ECO:0000313|EMBL:BAJ76444.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_0_curated_195
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

208882..210090
DNA (1209bp) protein (403aa)
atoB; acetyl-CoA acetyltransferase; K00632 acetyl-CoA acyltransferase [EC:2.3.1.16]
acetyl-CoA acetyltransferase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003456EDD
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:KEP75758.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
scnpilot_p_inoc_scaffold_0_curated_196
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

210087..212225
DNA (2139bp) protein (713aa)
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003467946
fadB; 3-hydroxyacyl-CoA dehydrogenase
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:BAJ76442.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_0_curated_197
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(212391..214340)
DNA (1950bp) protein (650aa)
dxs; deoxyxylulose-5-phosphate synthase; K01662 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003458AD3
scnpilot_p_inoc_scaffold_0_curated_198
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(214506..217340)
DNA (2835bp) protein (945aa)
acnA; aconitase A; K01681 aconitate hydratase 1 [EC:4.2.1.3]
Aconitate hydratase {ECO:0000256|RuleBase:RU361275}; Short=Aconitase {ECO:0000256|RuleBase:RU361275};; EC=4.2.1.3 {ECO:0000256|RuleBase:RU361275};; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
Aconitase A n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NEZ7_MICTS
scnpilot_p_inoc_scaffold_0_curated_199
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(217476..218225)
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI00034C2CED
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ76439.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_0_curated_200
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(218222..218830)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NEZ5_MICTS
Uncharacterized protein {ECO:0000313|EMBL:KEP75754.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
hypothetical protein
scnpilot_p_inoc_scaffold_0_curated_201
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(218827..219282)
DNA (456bp) protein (152aa)
dut; dUTPase; K01520 dUTP pyrophosphatase [EC:3.6.1.23]
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071036};; dUTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00116}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
deoxyuridine 5''''-triphosphate nucleotidohydrolase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B50BAB
scnpilot_p_inoc_scaffold_0_curated_202
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

219295..219786
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI0003498F4A
Uncharacterized protein {ECO:0000313|EMBL:KEP75752.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
hypothetical protein
scnpilot_p_inoc_scaffold_0_curated_203
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(219761..220054)
DNA (294bp) protein (98aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI00034828E9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEP75751.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
scnpilot_p_inoc_scaffold_0_curated_204
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

220266..221315
DNA (1050bp) protein (350aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B6E569
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ76434.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_0_curated_205
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(221321..222448)
DNA (1128bp) protein (376aa)
Uncharacterized proteins of the AP superfamily n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NEZ0_MICTS
Nucleotide pyrophosphatase {ECO:0000313|EMBL:KEP76285.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
hypothetical protein
scnpilot_p_inoc_scaffold_0_curated_206
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

222519..224978
DNA (2460bp) protein (820aa)
gyrA; type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit; K02469 DNA gyrase subunit A [EC:5.99.1.3]
DNA topoisomerase (ATP-hydrolyzing) {ECO:0000256|SAAS:SAAS00075954}; EC=5.99.1.3 {ECO:0000256|SAAS:SAAS00075954};; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NEY9_MICTS
scnpilot_p_inoc_scaffold_0_curated_207
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(225171..227186)
DNA (2016bp) protein (672aa)
gyrB; type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit; K02470 DNA gyrase subunit B [EC:5.99.1.3]
DNA topoisomerase IV subunit B n=1 Tax=Microbacterium sp. B19 RepID=UPI00034782EB
Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit {ECO:0000313|EMBL:BAJ76431.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_0_curated_208
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

227406..227627
DNA (222bp) protein (74aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI0003469708
Uncharacterized protein {ECO:0000313|EMBL:KEP76287.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
hypothetical protein
scnpilot_p_inoc_scaffold_0_curated_209
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(227660..228718)
DNA (1059bp) protein (353aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201};; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI000349A754
alanine racemase
scnpilot_p_inoc_scaffold_0_curated_210
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(228715..229365)
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI00034A3218
alanine racemase
Alanine racemase {ECO:0000313|EMBL:BAJ76428.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
Displaying items 181-210 of 1693 in total

View Taxonomy