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scnpilot_p_inoc_scaffold_0_curated

Search features with annotation key words

Displaying items 151-180 of 1693 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_0_curated_151
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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163751..164383
DNA (633bp) protein (211aa)
TetR family transcriptional regulator n=1 Tax=Microbacterium sp. B19 RepID=UPI00034DD016
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:BAJ76489.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_0_curated_152
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

164502..165383
DNA (882bp) protein (294aa)
shikimate 5-dehydrogenase; K00014 shikimate dehydrogenase [EC:1.1.1.25]
shikimate dehydrogenase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034A6100
Shikimate 5-dehydrogenase {ECO:0000313|EMBL:BAJ76488.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_0_curated_153
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

165397..166716
DNA (1320bp) protein (440aa)
major facilitator transporter n=1 Tax=Microbacterium sp. B19 RepID=UPI000349A317
permease of the major facilitator superfamily
Permease of the major facilitator superfamily {ECO:0000313|EMBL:BAJ76487.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_0_curated_154
Sanguibacter keddieii, Sanguibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(166769..168007)
DNA (1239bp) protein (413aa)
Uncharacterized protein n=1 Tax=Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74) RepID=D1BFL4_SANKS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ23517.1}; TaxID=446469 species="Bacteria; Actinobacteria; Micrococcales; Sanguibacteraceae; Sanguibacter.;" source="Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 /; ST-74).;"
scnpilot_p_inoc_scaffold_0_curated_155
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(168110..169186)
DNA (1077bp) protein (359aa)
aroB; 3-dehydroquinate synthetase; K01735 3-dehydroquinate synthase [EC:4.2.3.4]
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
3-dehydroquinate synthase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003491969
scnpilot_p_inoc_scaffold_0_curated_156
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(169183..169719)
DNA (537bp) protein (179aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
shikimate kinase; K00891 shikimate kinase [EC:2.7.1.71]
shikimate kinase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034D9E87
scnpilot_p_inoc_scaffold_0_curated_157
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(169706..170932)
DNA (1227bp) protein (409aa)
chorismate synthase; K01736 chorismate synthase [EC:4.2.3.5]
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
Chorismate synthase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NFK2_MICTS
scnpilot_p_inoc_scaffold_0_curated_158
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(170937..171773)
DNA (837bp) protein (279aa)
shikimate 5-dehydrogenase; K00014 shikimate dehydrogenase [EC:1.1.1.25]
Shikimate 5-dehydrogenase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NFK1_MICTS
Shikimate 5-dehydrogenase {ECO:0000313|EMBL:BAJ76483.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_0_curated_159
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(171767..173395)
DNA (1629bp) protein (543aa)
Predicted periplasmic solute-binding protein n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NFK0_MICTS
periplasmic solute-binding protein; K07082 UPF0755 protein
Predicted periplasmic solute-binding protein {ECO:0000313|EMBL:BAJ76482.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_0_curated_160
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(173397..173870)
DNA (474bp) protein (158aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
endonuclease; K07447 putative holliday junction resolvase [EC:3.1.-.-]
Holliday junction resolvase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034A1EC2
scnpilot_p_inoc_scaffold_0_curated_161
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(173867..176536)
DNA (2670bp) protein (890aa)
alaS; alanyl-tRNA synthetase; K01872 alanyl-tRNA synthetase [EC:6.1.1.7]
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
alanyl-tRNA synthetase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003480A72
scnpilot_p_inoc_scaffold_0_curated_162
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(176597..176884)
DNA (288bp) protein (96aa)
ATPase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034AB455
ATPase {ECO:0000313|EMBL:KEP75799.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
ATPase
scnpilot_p_inoc_scaffold_0_curated_163
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(177234..177863)
DNA (630bp) protein (210aa)
30S ribosomal protein S4 n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NFJ6_MICTS
rpsD; ribosomal protein S4; K02986 small subunit ribosomal protein S4
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_0_curated_164
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(178082..179461)
DNA (1380bp) protein (460aa)
ATPase AAA n=1 Tax=Microbacterium sp. B19 RepID=UPI00034D18BB
ATPase; K07478 putative ATPase
ATPase {ECO:0000313|EMBL:BAJ76477.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_0_curated_165
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

179569..179856
DNA (288bp) protein (96aa)
Predicted dioxygenase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NFJ4_MICTS
dioxygenase
Predicted dioxygenase {ECO:0000313|EMBL:BAJ76476.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_0_curated_166
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

179938..181497
DNA (1560bp) protein (520aa)
hypothetical protein, partial n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B736DC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ76475.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_0_curated_167
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

181562..182101
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI0003470630
Uncharacterized protein {ECO:0000313|EMBL:KEP75795.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
SAM-dependent methyltransferase
scnpilot_p_inoc_scaffold_0_curated_168
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(182114..184366)
DNA (2253bp) protein (751aa)
relA; guanosine polyphosphate pyrophosphohydrolase/synthetase; K00951 GTP pyrophosphokinase [EC:2.7.6.5]
Guanosine polyphosphate pyrophosphohydrolase/synthetase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NFJ1_MICTS
Guanosine polyphosphate pyrophosphohydrolase/synthetase {ECO:0000313|EMBL:BAJ76473.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_0_curated_169
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(184434..185420)
DNA (987bp) protein (329aa)
Protein-export membrane protein SecF n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NFJ0_MICTS
preprotein translocase subunit SecF; K03074 preprotein translocase subunit SecF
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_0_curated_170
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(185420..187129)
DNA (1710bp) protein (570aa)
Protein translocase subunit SecD n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NFI9_MICTS
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
preprotein translocase subunit SecD; K03072 preprotein translocase subunit SecD
scnpilot_p_inoc_scaffold_0_curated_171
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(187178..187627)
DNA (450bp) protein (150aa)
Preprotein translocase subunit YajC n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NFI8_MICTS
preprotein translocase subunit YajC; K03210 preprotein translocase subunit YajC
Preprotein translocase subunit YajC {ECO:0000313|EMBL:BAJ76470.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_0_curated_172
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(187706..188755)
DNA (1050bp) protein (350aa)
ruvB; holliday junction resolvasome, helicase subunit; K03551 holliday junction DNA helicase RuvB [EC:3.6.4.12]
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
Holliday junction DNA helicase RuvB n=1 Tax=Microbacterium sp. B19 RepID=UPI00034D2063
scnpilot_p_inoc_scaffold_0_curated_173
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(188748..189368)
DNA (621bp) protein (207aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
holliday junction resolvasome, DNA-binding subunit; K03550 holliday junction DNA helicase RuvA [EC:3.6.4.12]
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NFI6_MICTS
scnpilot_p_inoc_scaffold_0_curated_174
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(189378..189992)
DNA (615bp) protein (205aa)
holliday junction resolvasome, endonuclease subunit; K01159 crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4]
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
crossover junction endodeoxyribonuclease RuvC n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B60FED
scnpilot_p_inoc_scaffold_0_curated_175
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(190032..190790)
DNA (759bp) protein (253aa)
Probable transcriptional regulatory protein MTES_3502 n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NFI4_MICTS
hypothetical protein
Probable transcriptional regulatory protein MTES_3502 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_0_curated_176
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(190801..191421)
DNA (621bp) protein (207aa)
glutamine amidotransferase; K08681 glutamine amidotransferase [EC:2.6.-.-]
Pyridoxal 5'-phosphate synthase subunit PdxT {ECO:0000256|HAMAP-Rule:MF_01615}; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01615};; Pdx2 {ECO:0000256|HAMAP-Rule:MF_01615}; Pyridoxal 5'-phosphate synthase glutaminase subunit {ECO:0000256|HAMAP-Rule:MF_01615}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
glutamine amidotransferase n=1 Tax=Microbacterium sp. B19 RepID=UPI000348A784
scnpilot_p_inoc_scaffold_0_curated_177
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(191411..192295)
DNA (885bp) protein (295aa)
pyridoxine biosynthesis protein; K06215 pyridoxine biosynthesis protein [EC:4.-.-.-]
Pyridoxal 5'-phosphate synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824}; Short=PLP synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824};; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01824};; Pdx1 {ECO:0000256|HAMAP-Rule:MF_01824}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
pyridoxal biosynthesis lyase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034CF344
scnpilot_p_inoc_scaffold_0_curated_178
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

192391..193731
DNA (1341bp) protein (447aa)
transcriptional regulator n=1 Tax=Microbacterium sp. B19 RepID=UPI0003490AF9
transcriptional regulator
Transcriptional regulator containing a DNA-binding HTH domain and an aminotransferase domain {ECO:0000313|EMBL:BAJ76463.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_0_curated_179
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

193728..194579
DNA (852bp) protein (284aa)
pyridoxal/pyridoxine/pyridoxamine kinase; K00868 pyridoxine kinase [EC:2.7.1.35]
Pyridoxal kinase {ECO:0000256|SAAS:SAAS00088591}; EC=2.7.1.35 {ECO:0000256|SAAS:SAAS00088591};; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
pyridoxamine kinase n=1 Tax=Microbacterium sp. B19 RepID=UPI000349F466
scnpilot_p_inoc_scaffold_0_curated_180
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(194676..195242)
DNA (567bp) protein (189aa)
HIT family hydrolase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034714CB
diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase
Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase {ECO:0000313|EMBL:BAJ76460.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
Displaying items 151-180 of 1693 in total

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