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scnpilot_p_inoc_scaffold_0_curated_158

Organism: scnpilot_dereplicated_Microbacterium_4

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(170937..171773)

Top 3 Functional Annotations

Value Algorithm Source
shikimate 5-dehydrogenase; K00014 shikimate dehydrogenase [EC:1.1.1.25] similarity KEGG
DB: KEGG
  • Identity: 76.2
  • Coverage: 277.0
  • Bit_score: 416
  • Evalue 5.00e-114
Shikimate 5-dehydrogenase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NFK1_MICTS similarity UNIREF
DB: UNIREF100
  • Identity: 76.2
  • Coverage: 277.0
  • Bit_score: 416
  • Evalue 1.60e-113
Shikimate 5-dehydrogenase {ECO:0000313|EMBL:BAJ76483.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.2
  • Coverage: 277.0
  • Bit_score: 416
  • Evalue 2.20e-113

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Taxonomy

Microbacterium testaceum → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 837
ATGCTGAGTCCCGTCCGGCTCGCGGTGTGGGGCGACCCGATCGACCATTCGCGGTCGCCGGCGCTGCACGCGGCGGCGTACCGCGCGTTGGATCTGCCCTGGGAGTACGGGCGGGAGCGGGTGACCGAGGCCGGCTTCGTCGGGGCCGTCGACGCTCTCGACGCCACCTGGCGCGGCCTCTCGCTGACGATGCCGCTGAAGAACGTGGCGGCGGAGAACGCGGTGTCCCTCGATGATGCGGCACGTCGGACGGGTGCGGTGAACACGTACCTGCTGACCGACGACGGGCCGCGCGGCTTCAACACCGACGTCGGGGGACTGGCCCGTGCCCTCCGCGAGGCCGGGGTGACGCGACCCCGCAACGCCCGGATCCTCGGGGCCGGCGCGACCGCCACCTCGGCGGTGCTGTCGCTGGCCGAGCTGGGCGCCGAGCGCGTCGAGGTGGTGGCCCGGCGTCCGGAAGCCGCCGCCGCTCTGCGCGCGTTGGGGCGCTCCGTCGGCGTCGACGTCGTGTCGGCCGCCTTCGACGCGCCCGGCACGCCGGACGCCGTCGCCGTCACCATCGGGGCGCTCCCCGGGGGAGTGGATGCCGGTCCCGGCATCCGTCCGTTCGCCGAGAACGGCGGTCTCCTCGTCGACGTCGTCTACGGAACCTGGCCGACCCCGCTCGCCGAACAGTGGCGTGCGGCGGGGAACACGGCGATCAACGGCCTGCCCATGCTGCTGCACCAGGCGCTGCTCCAGGTGCGGGTCTTCGTCGGCGGCGACCCCGCGGTGCCGCTCGAGCGCGAAGACGACGTGCTCGCCGCGATGCGCGCCGCGGTCATGGGAGGATAG
PROTEIN sequence
Length: 279
MLSPVRLAVWGDPIDHSRSPALHAAAYRALDLPWEYGRERVTEAGFVGAVDALDATWRGLSLTMPLKNVAAENAVSLDDAARRTGAVNTYLLTDDGPRGFNTDVGGLARALREAGVTRPRNARILGAGATATSAVLSLAELGAERVEVVARRPEAAAALRALGRSVGVDVVSAAFDAPGTPDAVAVTIGALPGGVDAGPGIRPFAENGGLLVDVVYGTWPTPLAEQWRAAGNTAINGLPMLLHQALLQVRVFVGGDPAVPLEREDDVLAAMRAAVMGG*