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scnpilot_p_inoc_scaffold_310_curated

Search features with annotation key words

Displaying items 91-113 of 113 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_310_curated_91
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(86308..87606)
DNA (1299bp) protein (433aa)
LVIVD repeat-containing protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T583_PALPW
lvivd repeat-containing protein
Uncharacterized protein {ECO:0000313|EMBL:KKB57698.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii DSM 19448 = WAL 12034.;"
scnpilot_p_inoc_scaffold_310_curated_92
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(87634..88902)
DNA (1269bp) protein (423aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T580_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ79874.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_310_curated_93
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(88889..89449)
DNA (561bp) protein (187aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T579_PALPW
RNA polymerase, sigma-24 subunit, ecf subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily
Uncharacterized protein {ECO:0000313|EMBL:EGK00730.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
scnpilot_p_inoc_scaffold_310_curated_94
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(89573..91651)
DNA (2079bp) protein (693aa)
WD40-like beta Propeller containing protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T578_PALPW
WD40-like beta Propeller containing protein {ECO:0000313|EMBL:ADQ79872.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
wd40-like beta propeller containing protein
scnpilot_p_inoc_scaffold_310_curated_95
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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91747..92346
DNA (600bp) protein (200aa)
Methyltransferase type 12 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T577_PALPW
methyltransferase type 12
Methyltransferase type 12 {ECO:0000313|EMBL:ADQ79871.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_310_curated_96
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(92426..94585)
DNA (2160bp) protein (720aa)
Translation elongation factor 2 (EF-2/EF-G) n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5B8_PALPW
translation elongation factor 2 (ef-2/ef-g); K02355 elongation factor G
Translation elongation factor 2 (EF-2/EF-G) {ECO:0000313|EMBL:ADQ79912.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_310_curated_97
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(94708..95337)
DNA (630bp) protein (210aa)
Phosphoesterase PA-phosphatase related protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T734_PALPW
phosphoesterase pa-phosphatase related protein
Phosphoesterase PA-phosphatase related protein {ECO:0000313|EMBL:ADQ80528.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_310_curated_98
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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95373..95942
DNA (570bp) protein (190aa)
NAD metabolism ATPase/kinase-like protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T735_PALPW
nad metabolism ATPase/kinase-like protein
NAD metabolism ATPase/kinase-like protein {ECO:0000313|EMBL:ADQ80529.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_310_curated_99
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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95955..96830
DNA (876bp) protein (292aa)
serine O-acetyltransferase (EC:2.3.1.30); K00640 serine O-acetyltransferase [EC:2.3.1.30]
Serine O-acetyltransferase {ECO:0000313|EMBL:ADQ80530.1}; EC=2.3.1.30 {ECO:0000313|EMBL:ADQ80530.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Serine O-acetyltransferase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T736_PALPW
scnpilot_p_inoc_scaffold_310_curated_100
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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96880..98034
DNA (1155bp) protein (385aa)
rRNA (guanine-n(2)-)-methyltransferase (EC:2.1.1.52); K07444 putative N6-adenine-specific DNA methylase [EC:2.1.1.-]
rRNA (Guanine-N(2)-)-methyltransferase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T737_PALPW
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_310_curated_101
Geofilum rubicundum, Geofilum, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(98078..98866)
DNA (789bp) protein (263aa)
Formate/nitrite transporter n=1 Tax=Formosa agariphila KMM 3901 RepID=T2KJF2_9FLAO
Formate efflux transporter {ECO:0000313|EMBL:GAO29371.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 15548.;"
Formate/nitrite family transporter
scnpilot_p_inoc_scaffold_310_curated_102
Geofilum rubicundum, Geofilum, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(98877..99602)
DNA (726bp) protein (242aa)
Pyruvate formate-lyase-activating enzyme {ECO:0000256|RuleBase:RU362053}; EC=1.97.1.4 {ECO:0000256|RuleBase:RU362053};; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 15548.;"
pyruvate formate-lyase activating enzyme (EC:1.97.1.4); K04069 pyruvate formate lyase activating enzyme [EC:1.97.1.4]
Pyruvate formate-lyase 1-activating enzyme n=2 Tax=Bacteroides RepID=R6K7V6_9BACE
scnpilot_p_inoc_scaffold_310_curated_103
Geofilum rubicundum, Geofilum, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(99667..101886)
DNA (2220bp) protein (740aa)
formate acetyltransferase; K00656 formate C-acetyltransferase [EC:2.3.1.54] rbh
acetyltransferase n=1 Tax=Porphyromonas levii RepID=UPI0003712426
Pyruvate formate-lyase {ECO:0000313|EMBL:GAO29369.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 15548.;"
scnpilot_p_inoc_scaffold_310_curated_104
unknown

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102618..102728
DNA (111bp) protein (37aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_310_curated_105
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

102752..102958
DNA (207bp) protein (69aa)
Uncharacterized protein n=2 Tax=Prevotella RepID=F8NCI6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AII64326.1}; TaxID=357276 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei.;"
hypothetical protein
scnpilot_p_inoc_scaffold_310_curated_106
Bacteroides sp. CAG:709, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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103036..103332
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:709 RepID=R6F171_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA95852.1}; TaxID=1262748 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:709.;"
hypothetical protein
scnpilot_p_inoc_scaffold_310_curated_107
Bacteroides cellulosilyticus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

104244..105011
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035F7F14
Uncharacterized protein {ECO:0000313|EMBL:EIY29233.1}; TaxID=997874 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides cellulosilyticus CL02T12C19.;"
hypothetical protein
scnpilot_p_inoc_scaffold_310_curated_108
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

105004..105906
DNA (903bp) protein (301aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000382CD0F
Uncharacterized protein {ECO:0000313|EMBL:EDY95064.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
hypothetical protein
scnpilot_p_inoc_scaffold_310_curated_109
Prevotella multisaccharivorax, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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106403..107611
DNA (1209bp) protein (403aa)
Transposase, mutator family n=1 Tax=Prevotella sp. MSX73 RepID=J5HX24_9BACT
Transposase mutator type {ECO:0000313|EMBL:EGN56053.1}; TaxID=688246 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella multisaccharivorax DSM 17128.;"
transposase
scnpilot_p_inoc_scaffold_310_curated_110
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(107714..107926)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CL03T12C18 RepID=I9SXV5_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY61246.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
scnpilot_p_inoc_scaffold_310_curated_111
Capnocytophaga sp. oral taxon 336, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

108541..109398
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Capnocytophaga sp. oral taxon 336 str. F0502 RepID=S3C2Q4_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EPE00558.1}; TaxID=1203603 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga sp. oral taxon 336 str. F0502.;"
AraC family transcriptional regulator
scnpilot_p_inoc_scaffold_310_curated_112
Capnocytophaga canimorsus, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

109683..110312
DNA (630bp) protein (210aa)
membrane protein n=1 Tax=Pasteurella pneumotropica RepID=UPI000374BF10
Uncharacterized protein {ECO:0000313|EMBL:CEN47315.1}; TaxID=28188 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga canimorsus.;"
hypothetical protein
scnpilot_p_inoc_scaffold_310_curated_113
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

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comp(110908..111891)
DNA (984bp) protein (328aa)
Major paralogous domain id=3878274 bin=GWF2_Bacteroidetes_38_335 species=Dysgonomonas gadei genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
secreted protein with Fibrobacter succinogenes major domain
Tax=BJP_IG2103_Bacteroidetes_37_22
Displaying items 91-113 of 113 in total

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