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scnpilot_p_inoc_scaffold_100_curated

Search features with annotation key words

Displaying items 31-60 of 151 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_100_curated_31
BJP_IG2102_Bacteroidetes_40_9, Bacteroidetes, Bacteria

Not on your lists

comp(39006..43034)
DNA (4029bp) protein (1343aa)
Dipeptidyl aminopeptidase/acylaminoacyl peptidase id=4527856 bin=GWF2_Bacteroidetes_40_13 species=Joostella marina genus=Joostella taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
peptidase S9 prolyl oligopeptidase active site domain-containing protein
Tax=BJP_IG2102_Bacteroidetes_40_9
scnpilot_p_inoc_scaffold_100_curated_32
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(43132..44016)
DNA (885bp) protein (295aa)
Transcriptional regulator, AraC family n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5F5_PALPW
transcriptional regulator, arac family
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ADQ79949.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_100_curated_33
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(44066..45163)
DNA (1098bp) protein (366aa)
cellulase (EC:3.2.1.4); K01179 endoglucanase [EC:3.2.1.4]
Cellulase {ECO:0000313|EMBL:ADQ79950.1}; EC=3.2.1.4 {ECO:0000313|EMBL:ADQ79950.1};; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Cellulase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5F6_PALPW
scnpilot_p_inoc_scaffold_100_curated_34
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(45179..46375)
DNA (1197bp) protein (399aa)
Cellobiose 2-epimerase {ECO:0000256|HAMAP-Rule:MF_00929}; Short=CE {ECO:0000256|HAMAP-Rule:MF_00929};; EC=5.1.3.11 {ECO:0000256|HAMAP-Rule:MF_00929};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Cellobiose 2-epimerase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5F7_PALPW
N-acylglucosamine 2-epimerase
scnpilot_p_inoc_scaffold_100_curated_35
Prevotella copri CAG:164, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(46427..49039)
DNA (2613bp) protein (871aa)
cellobiose phosphorylase (EC:2.4.1.20)
Cellobiose-phosphorylase n=1 Tax=Prevotella copri CAG:164 RepID=R6C3D8_9BACT
Cellobiose-phosphorylase {ECO:0000313|EMBL:CDA65971.1}; TaxID=1263102 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella copri CAG:164.;"
scnpilot_p_inoc_scaffold_100_curated_36
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(49042..50883)
DNA (1842bp) protein (614aa)
Uncharacterized protein id=4483672 bin=GWC2_Bacteroidetes_46_850 species=Bacteroides nordii genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
Na+/glucose symporter
Tax=GWC2_Bacteroidetes_46_850_curated
scnpilot_p_inoc_scaffold_100_curated_37
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(50954..52144)
DNA (1191bp) protein (397aa)
4-O-beta-D-mannosyl-D-glucose phosphorylase {ECO:0000256|HAMAP-Rule:MF_00928}; Short=MGP {ECO:0000256|HAMAP-Rule:MF_00928};; Short=Mannosylglucose phosphorylase {ECO:0000256|HAMAP-Rule:MF_00928};; EC=2.4.1.281 {ECO:0000256|HAMAP-Rule:MF_00928};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
4-O-beta-D-mannosyl-D-glucose phosphorylase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5G1_PALPW
glycosidase-like protein
scnpilot_p_inoc_scaffold_100_curated_38
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(52149..54479)
DNA (2331bp) protein (777aa)
mannan endO-1,4-beta-mannosidase (EC:3.2.1.78)
Mannan endo-1,4-beta-mannosidase {ECO:0000313|EMBL:ADQ79957.1}; EC=3.2.1.78 {ECO:0000313|EMBL:ADQ79957.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Mannan endo-1,4-beta-mannosidase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5G3_PALPW
scnpilot_p_inoc_scaffold_100_curated_39
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(54498..56228)
DNA (1731bp) protein (577aa)
Uncharacterized protein n=1 Tax=Bacteroides salyersiae WAL 10018 = DSM 18765 = JCM 12988 RepID=R0JEX2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGK03706.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
Acetyl esterase (deacetylase)
scnpilot_p_inoc_scaffold_100_curated_40
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(56249..57562)
DNA (1314bp) protein (438aa)
mannan endo-1,4-beta-mannosidase (EC:3.2.1.78)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IWZ7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK02344.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
scnpilot_p_inoc_scaffold_100_curated_41
Draconibacterium orientale, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(57656..59758)
DNA (2103bp) protein (701aa)
cell surface receptor IPT/TIG domain-containing protein n=1 Tax=Marinilabilia salmonicolor RepID=UPI00029AFAB5
Uncharacterized protein {ECO:0000313|EMBL:AHW58762.1}; TaxID=1168034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium orientale.;"
cell surface receptor IPT/TIG domain-containing protein
scnpilot_p_inoc_scaffold_100_curated_42
Draconibacterium orientale, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(59790..61040)
DNA (1251bp) protein (417aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:443 RepID=R6MM59_9BACE
Uncharacterized protein {ECO:0000313|EMBL:AHW58763.1}; TaxID=1168034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium orientale.;"
hypothetical protein
scnpilot_p_inoc_scaffold_100_curated_43
Saccharicrinis fermentans, Saccharicrinis, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(61061..62740)
DNA (1680bp) protein (560aa)
carbohydrate-binding protein SusD n=1 Tax=Anaerophaga thermohalophila RepID=UPI000237BE97
SusD family protein {ECO:0000313|EMBL:GAF03780.1}; TaxID=869213 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Saccharicrinis.;" source="Saccharicrinis fermentans DSM 9555 = JCM 21142.;"
RagB/SusD domain-containing protein
scnpilot_p_inoc_scaffold_100_curated_44
Geofilum rubicundum, Geofilum, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(62765..66007)
DNA (3243bp) protein (1081aa)
TonB-dependent receptor plug n=1 Tax=Bacteroides salanitronis (strain DSM 18170 / JCM 13567 / BL78) RepID=F0R0R8_BACSH
TonB-dependent receptor {ECO:0000313|EMBL:GAO29140.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 15548.;"
TonB-dependent receptor plug
scnpilot_p_inoc_scaffold_100_curated_45
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(66320..67003)
DNA (684bp) protein (228aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T6I1_PALPW
hypothetical protein; K09125 hypothetical protein
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_100_curated_46
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(67144..68724)
DNA (1581bp) protein (527aa)
Glycoside hydrolase family 5 protein id=4973648 bin=GWA2_Bacteroidetes_40_14 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_40_14 organism_group=Bacteroidetes organism_desc=Good
xylanase rbh
Tax=GWE2_Bacteroidetes_40_63_curated
scnpilot_p_inoc_scaffold_100_curated_47
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

68888..73030
DNA (4143bp) protein (1381aa)
Uncharacterized protein id=4745612 bin=GWC2_Bacteroidetes_40_13 species=Bacteroides salyersiae genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
Histidine kinase-like ATPase
Tax=GWE2_Bacteroidetes_40_63_curated
scnpilot_p_inoc_scaffold_100_curated_48
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(73079..73639)
DNA (561bp) protein (187aa)
id=1849475 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
Tax=GWE2_Bacteroidetes_40_63_curated
scnpilot_p_inoc_scaffold_100_curated_49
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(73750..75459)
DNA (1710bp) protein (570aa)
Uncharacterized protein id=1849473 bin=GWD2_Bacteroidetes_40_43 species=Bacteroides salyersiae genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
RagB/SusD domain-containing protein
Tax=GWE2_Bacteroidetes_40_63_curated
scnpilot_p_inoc_scaffold_100_curated_50
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(75484..78327)
DNA (2844bp) protein (948aa)
SusC/RagA family TonB-linked outer membrane protein id=1877763 bin=GWE2_Bacteroidetes_40_63 species=Bacteroides salyersiae genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_63 organism_group=Bacteroidetes organism_desc=Good
TonB-dependent receptor plug
Tax=GWE2_Bacteroidetes_40_63_curated
scnpilot_p_inoc_scaffold_100_curated_51
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(78359..80074)
DNA (1716bp) protein (572aa)
Uncharacterized protein id=4269274 bin=GWF2_Bacteroidetes_40_13 species=Bacteroides salyersiae genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
RagB/SusD family protein
Tax=GWE2_Bacteroidetes_40_63_curated
scnpilot_p_inoc_scaffold_100_curated_52
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(80088..83114)
DNA (3027bp) protein (1009aa)
SusC/RagA family TonB-linked outer membrane protein id=4007571 bin=GWC2_Bacteroidetes_40_13 species=Bacteroides salyersiae genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
hypothetical protein rbh
Tax=GWE2_Bacteroidetes_40_63_curated
scnpilot_p_inoc_scaffold_100_curated_53
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(83132..83803)
DNA (672bp) protein (224aa)
id=1999900 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
Tax=GWE2_Bacteroidetes_40_63_curated
scnpilot_p_inoc_scaffold_100_curated_54
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(83881..84324)
DNA (444bp) protein (148aa)
id=1999901 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
Tax=GWE2_Bacteroidetes_40_63_curated
scnpilot_p_inoc_scaffold_100_curated_55
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(84426..85853)
DNA (1428bp) protein (476aa)
id=1999902 bin=GWD2_Bacteroidetes_40_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
Tax=GWE2_Bacteroidetes_40_63_curated
scnpilot_p_inoc_scaffold_100_curated_56
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(85998..88172)
DNA (2175bp) protein (725aa)
alpha-L-arabinofuranosidase B id=4269265 bin=GWF2_Bacteroidetes_40_13 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
alpha-L-arabinofuranosidase B
Tax=GWE2_Bacteroidetes_40_63_curated
scnpilot_p_inoc_scaffold_100_curated_57
unknown

Not on your lists

comp(88265..89566)
DNA (1302bp) protein (434aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_100_curated_58
Bacteroides sp. CAG:98, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(89711..92476)
DNA (2766bp) protein (922aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:98 RepID=R7NT21_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDF16574.1}; TaxID=1262754 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:98.;"
family 2 glycoside hydrolase
scnpilot_p_inoc_scaffold_100_curated_59
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

92685..94472
DNA (1788bp) protein (596aa)
glycoside hydrolase family protein; K05349 beta-glucosidase [EC:3.2.1.21]
Glycoside hydrolase family 3 domain protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T6A9_PALPW
Glycoside hydrolase family 3 domain protein {ECO:0000313|EMBL:ADQ80253.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_100_curated_60
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

94497..94868
DNA (372bp) protein (124aa)
glycoside hydrolase family protein; K05349 beta-glucosidase [EC:3.2.1.21]
Glycoside hydrolase family 3 domain protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T6A9_PALPW
Glycoside hydrolase family 3 domain protein {ECO:0000313|EMBL:ADQ80253.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Displaying items 31-60 of 151 in total

View Taxonomy