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scnpilot_p_inoc_scaffold_100_curated

Search features with annotation key words

Displaying items 121-150 of 151 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_100_curated_121
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

185432..188008
DNA (2577bp) protein (859aa)
hypothetical protein n=1 Tax=Thermophagus xiamenensis RepID=UPI000255CDE3
Secreted protein {ECO:0000313|EMBL:EFI13777.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
Glycosyl hydrolase family 67 N-terminus.
scnpilot_p_inoc_scaffold_100_curated_122
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

188026..190116
DNA (2091bp) protein (697aa)
Putative glycosyl hydrolase n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S5G1_PEDSD
glycosyl hydrolase
Tax=GWB2_Bacteroidetes_41_8_curated
scnpilot_p_inoc_scaffold_100_curated_123
Prevotella oryzae, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

190448..193591
DNA (3144bp) protein (1048aa)
TonB-linked outer membrane protein n=1 Tax=Anaerophaga thermohalophila RepID=UPI0003005694
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EXG77771.1}; Flags: Precursor;; TaxID=915438 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella oryzae DSM 17970.;"
tonb-dependent receptor plug
scnpilot_p_inoc_scaffold_100_curated_124
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

193603..195555
DNA (1953bp) protein (651aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0P300_9SPHI
HPB19 {ECO:0000313|EMBL:CDS93707.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
RagB/SusD domain-containing protein
scnpilot_p_inoc_scaffold_100_curated_125
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

195595..198504
DNA (2910bp) protein (970aa)
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0FYA2_ECHVK
TonB-dependent receptor plug
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:AGA78899.1}; Flags: Precursor;; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
scnpilot_p_inoc_scaffold_100_curated_126
Galbibacter marinus, Galbibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

198525..200318
DNA (1794bp) protein (598aa)
glycan metabolism protein RagB n=1 Tax=Thermophagus xiamenensis RepID=UPI000255CDDB
Uncharacterized protein {ECO:0000313|EMBL:EKF55450.1}; TaxID=555500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Galbibacter.;" source="Galbibacter marinus.;"
hypothetical protein
scnpilot_p_inoc_scaffold_100_curated_127
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

200347..201375
DNA (1029bp) protein (343aa)
adhesin n=1 Tax=Anaerophaga thermohalophila RepID=UPI0002FD5ABE
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ24470.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein
scnpilot_p_inoc_scaffold_100_curated_128
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(201429..201956)
DNA (528bp) protein (176aa)
FMN-binding domain protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5D4_PALPW
fmN-binding domain protein; K03612 electron transport complex protein RnfG
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_100_curated_129
GWF2_Bacteroidetes_49_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(201972..203084)
DNA (1113bp) protein (371aa)
ABC-2 type transporter id=3166527 bin=GWF2_Bacteroidetes_49_14 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
ABC transporter; K09686 antibiotic transport system permease protein
Tax=GWF2_Bacteroidetes_49_14_curated
scnpilot_p_inoc_scaffold_100_curated_130
GWF2_Bacteroidetes_49_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(203086..204192)
DNA (1107bp) protein (369aa)
Putative uncharacterized protein id=3166529 bin=GWF2_Bacteroidetes_49_14 species=Dysgonomonas gadei genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
ABC transporter; K09686 antibiotic transport system permease protein
Tax=GWF2_Bacteroidetes_49_14_curated
scnpilot_p_inoc_scaffold_100_curated_131
Bacteroides fluxus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(204194..204949)
DNA (756bp) protein (252aa)
sulfate-transporting ATPase (EC:3.6.3.25)
ABC transporter, ATP-binding protein n=1 Tax=Bacteroides fluxus YIT 12057 RepID=F3PY06_9BACE
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EGF51273.1}; TaxID=763034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fluxus YIT 12057.;"
scnpilot_p_inoc_scaffold_100_curated_132
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(204946..205989)
DNA (1044bp) protein (348aa)
ABC transporter related protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T802_PALPW
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADQ80846.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_100_curated_133
GWF2_Bacteroidetes_49_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(205993..206889)
DNA (897bp) protein (299aa)
Putative ABC transport system, lipoprotein id=3166541 bin=GWF2_Bacteroidetes_49_14 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
ABC transporter lipoprotein; K01993 HlyD family secretion protein
Tax=GWF2_Bacteroidetes_49_14_curated
scnpilot_p_inoc_scaffold_100_curated_134
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(206909..208192)
DNA (1284bp) protein (428aa)
Outer membrane efflux protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T804_PALPW
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:ADQ80848.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_100_curated_135
GWF2_Bacteroidetes_49_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(208209..208844)
DNA (636bp) protein (212aa)
Putative uncharacterized protein id=3166548 bin=GWF2_Bacteroidetes_49_14 species=Alistipes indistinctus genus=Alistipes taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
transcriptional regulator, tetr family
Tax=GWF2_Bacteroidetes_49_14_curated
scnpilot_p_inoc_scaffold_100_curated_136
Flexibacter litoralis, Flexibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(208930..209565)
DNA (636bp) protein (212aa)
Putative membrane protein n=1 Tax=Flexibacter litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 / NCIMB 1366 / Sio-4) RepID=I4AMS5_FLELS
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AFM05260.1}; Flags: Precursor;; TaxID=880071 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Flexibacter.;" source="Flexibacter litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 /; NCIMB 1366 / Sio-4).;"
scnpilot_p_inoc_scaffold_100_curated_137
Bacteroides thetaiotaomicron CAG:40, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(209705..211303)
DNA (1599bp) protein (533aa)
Beta-xylosidase n=1 Tax=Bacteroides thetaiotaomicron CAG:40 RepID=R7KZB6_9BACE
Beta-xylosidase {ECO:0000313|EMBL:CDE80267.1}; TaxID=1263054 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides thetaiotaomicron CAG:40.;"
hypothetical protein
scnpilot_p_inoc_scaffold_100_curated_138
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(211325..212596)
DNA (1272bp) protein (424aa)
Beta-lactamase n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EVX8_EMTOG
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:AFK03831.1}; Flags: Precursor;; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
scnpilot_p_inoc_scaffold_100_curated_139
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

212733..213989
DNA (1257bp) protein (419aa)
NADH-dependent dehydrogenase id=1884183 bin=GWD2_Bacteroidales_45_23 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
NADH-dependent dehydrogenase
Tax=GWC2_Bacteroidetes_46_850_curated
scnpilot_p_inoc_scaffold_100_curated_140
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

214010..217429
DNA (3420bp) protein (1140aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036DA562
Uncharacterized protein {ECO:0000313|EMBL:CEA16190.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
PBS lyase HEAT-like repeat protein
scnpilot_p_inoc_scaffold_100_curated_141
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

217815..218360
DNA (546bp) protein (182aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SA72_PEDSD
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_100_curated_142
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

218427..219404
DNA (978bp) protein (326aa)
Anti-FecI sigma factor, FecR n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SA75_PEDSD
anti-FecI sigma factor FecR
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:ADY53639.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
scnpilot_p_inoc_scaffold_100_curated_143
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

219577..220440
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CHB3_ELIME
Uncharacterized protein {ECO:0000313|EMBL:EOR28385.1}; TaxID=1216967 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535.;"
hypothetical protein
scnpilot_p_inoc_scaffold_100_curated_144
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

220479..221816
DNA (1338bp) protein (446aa)
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SA74_PEDSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY53638.1}; Flags: Precursor;; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
scnpilot_p_inoc_scaffold_100_curated_145
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

221910..225251
DNA (3342bp) protein (1114aa)
TonB-dependent receptor n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SA76_PEDSD
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:ADY53640.1}; Flags: Precursor;; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
scnpilot_p_inoc_scaffold_100_curated_146
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

225279..227189
DNA (1911bp) protein (637aa)
RagB/SusD domain protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SAM0_PEDSD
RagB/SusD domain protein {ECO:0000313|EMBL:ADY53641.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
RagB/SusD domain-containing protein
scnpilot_p_inoc_scaffold_100_curated_147
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

227213..231484
DNA (4272bp) protein (1424aa)
beta-N-acetylhexosaminidase (EC:3.2.1.52)
Uncharacterized protein n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K5ZLW5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB57485.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii DSM 19448 = WAL 12034.;"
scnpilot_p_inoc_scaffold_100_curated_148
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

231505..232806
DNA (1302bp) protein (434aa)
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SAM2_PEDSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY53643.1}; Flags: Precursor;; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
scnpilot_p_inoc_scaffold_100_curated_149
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

232820..234091
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SAM2_PEDSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY53643.1}; Flags: Precursor;; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
scnpilot_p_inoc_scaffold_100_curated_150
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

234141..236891
DNA (2751bp) protein (917aa)
Alpha-L-rhamnosidase id=4213415 bin=GWF2_Bacteroidetes_42_66 species=Chitinophaga pinensis genus=Chitinophaga taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
alpha-L-rhamnosidase
Tax=GWE2_Bacteroidetes_42_39_curated
Displaying items 121-150 of 151 in total

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