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scnpilot_p_inoc_scaffold_100_curated_142

Organism: scnpilot_dereplicated_Paludibacter_1

near complete RP 51 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 218427..219404

Top 3 Functional Annotations

Value Algorithm Source
Anti-FecI sigma factor, FecR n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SA75_PEDSD similarity UNIREF
DB: UNIREF100
  • Identity: 48.0
  • Coverage: 319.0
  • Bit_score: 275
  • Evalue 5.10e-71
anti-FecI sigma factor FecR similarity KEGG
DB: KEGG
  • Identity: 48.0
  • Coverage: 319.0
  • Bit_score: 275
  • Evalue 1.60e-71
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:ADY53639.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.0
  • Coverage: 319.0
  • Bit_score: 275
  • Evalue 7.20e-71

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Taxonomy

Pseudopedobacter saltans → Pseudopedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 978
ATGAACGATCAATTTTCAAACTTGGTAGCAAAAGTACTTGCCAACGAAGCTAGTGCTGAAGAAAGAAACCAGCTTCGGGAGTACTTGCAATCGGATGCCGATCAACAACTCGTTTATGAGCAACTGAAAGAATACTGGAATGCCGACGTTCGACTTTCTTCGGCTCCGATCAGCGATTTTGAAGCTACCTTGCTGCAGAACTTATCTTCCGAAAACGAACGCCTGAGTAAGGGTCGGACAAAAAGGCTCACCACCCTGTTGCGGATTTCGAGTGTAGCTGCATCCTTGTTTTTTGTCGTTTCGTGTTACTTGTATTTTATATACCAGCCCGAAGGGAGTCATTTGCTTACCTATGCAGCTCAAAATGATCCGCTGGAATACCTGTTGAGCGACGGAAGCCGTATTAAAGTCAACAAAAACAGCTCGGTTACTATCGACGAGAGTTTTGGCCGGAAATTCAGAAAAGTAAAACTCGAAGGCGAAGCCTATTTCGAGGTGAAACACGATGCCGTCCGTCCGTTTGTAGTGCAAACCGCCGGAACATCGGTAACTGTATTGGGTACCCGTTTCAATGTCAGAGAAGAAACGGATAAAGTAATTACTACGCTTGTAGAAGGATCGGTTCAGTTTGCTGCCGGCGATTGCGATAAAATACTGGAACCCGGCGAAGAACTGTGCTACAATGTGAGTTCGGGAAAGTATAACCTGTATGCAACCGACATCCAACTCAGTACAGCCTGGGTGACAGGACGATATACCTATCACAACCTGAAGTTTGCCGATTTGCTGCAAAAATTATCCTATATATACAAAATTCCGATCGAAATTTCGGGTTCGGCCGAATCGTTCGGTAAAGTAGTGTCTGCATCCTTTCTATACGATGAGCCTCTTCCCGATATATTATCGGCGCTCGAAAGCGAGTTGAATTTCAGCTTCAGCCAGAGTGCCGGGAAAATAATTATAAGTCCTCCTCAATAA
PROTEIN sequence
Length: 326
MNDQFSNLVAKVLANEASAEERNQLREYLQSDADQQLVYEQLKEYWNADVRLSSAPISDFEATLLQNLSSENERLSKGRTKRLTTLLRISSVAASLFFVVSCYLYFIYQPEGSHLLTYAAQNDPLEYLLSDGSRIKVNKNSSVTIDESFGRKFRKVKLEGEAYFEVKHDAVRPFVVQTAGTSVTVLGTRFNVREETDKVITTLVEGSVQFAAGDCDKILEPGEELCYNVSSGKYNLYATDIQLSTAWVTGRYTYHNLKFADLLQKLSYIYKIPIEISGSAESFGKVVSASFLYDEPLPDILSALESELNFSFSQSAGKIIISPPQ*