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scnpilot_p_inoc_scaffold_100_curated

Search features with annotation key words

Displaying items 1-30 of 151 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_100_curated_1
Geofilum rubicundum, Geofilum, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3..1601)
DNA (1599bp) protein (533aa)
Conserved domain protein n=1 Tax=Prevotella sp. CAG:732 RepID=R6X3S2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:GAO28924.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 15548.;"
scnpilot_p_inoc_scaffold_100_curated_2
unknown

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1618..1881
DNA (264bp) protein (88aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_100_curated_3
unknown

Not on your lists

comp(2076..2720)
DNA (645bp) protein (215aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_100_curated_4
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2875..4248)
DNA (1374bp) protein (458aa)
Putative uncharacterized protein id=4064029 bin=GWF2_Bacteroidetes_41_31 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
Tax=GWF2_Bacteroidetes_41_31_curated
scnpilot_p_inoc_scaffold_100_curated_5
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4763..7648
DNA (2886bp) protein (962aa)
GHMP kinase, N-terminal domain protein n=1 Tax=Bacteroides fragilis 3_1_12 RepID=E4VRZ3_BACFG
Fucokinase {ECO:0000313|EMBL:KER50836.1}; TaxID=817 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis.;"
fkp; bifunctional fucokinase/L-fucose-1-P-guanylyltransferase rbh
scnpilot_p_inoc_scaffold_100_curated_6
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7651..8352)
DNA (702bp) protein (234aa)
phosphoadenylylsulfate reductase (thioredoxin) (EC:1.8.4.8); K00390 phosphoadenosine phosphosulfate reductase [EC:1.8.4.8]
Phosphoadenylylsulfate reductase (Thioredoxin) {ECO:0000313|EMBL:ADQ80680.1}; EC=1.8.4.8 {ECO:0000313|EMBL:ADQ80680.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Phosphoadenylylsulfate reductase (Thioredoxin) n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7I6_PALPW
scnpilot_p_inoc_scaffold_100_curated_7
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8411..9715)
DNA (1305bp) protein (435aa)
sulfate adenylyltransferase subunit 1 (EC:2.7.7.4); K00956 sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
Sulfate adenylyltransferase subunit 1 {ECO:0000256|SAAS:SAAS00056000}; EC=2.7.7.4 {ECO:0000256|SAAS:SAAS00055979};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Sulfate adenylyltransferase subunit 1 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7I5_PALPW
scnpilot_p_inoc_scaffold_100_curated_8
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9758..10648)
DNA (891bp) protein (297aa)
sulfate adenylyltransferase subunit 2 (EC:2.7.7.4); K00957 sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
Sulfate adenylyltransferase {ECO:0000256|SAAS:SAAS00055732}; EC=2.7.7.4 {ECO:0000256|SAAS:SAAS00055732};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Sulfate adenylyltransferase subunit 2 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7I4_PALPW
scnpilot_p_inoc_scaffold_100_curated_9
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10667..11995)
DNA (1329bp) protein (443aa)
glutamate-1-semialdehyde-2,1-aminomutase; K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Prevotella bryantii B14 RepID=D8DTV2_PREBR
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_100_curated_10
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11964..12929)
DNA (966bp) protein (322aa)
delta-aminolevulinic acid dehydratase; K01698 porphobilinogen synthase [EC:4.2.1.24]
Porphobilinogen synthase n=1 Tax=Prevotella sp. CAG:604 RepID=R6BB77_9BACT
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_100_curated_11
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12926..15034)
DNA (2109bp) protein (703aa)
hydroxymethylbilane synthase/uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase; K13542 uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
hypothetical protein n=1 Tax=Bacteroides propionicifaciens RepID=UPI00035EF33B
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_100_curated_12
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15019..15993)
DNA (975bp) protein (325aa)
hemA; glutamyl-tRNA reductase; K02492 glutamyl-tRNA reductase [EC:1.2.1.70]
Glutamyl-tRNA reductase n=1 Tax=Prevotella sp. CAG:604 RepID=R6BGA1_9BACT
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_100_curated_13
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15965..16444)
DNA (480bp) protein (160aa)
siroheme synthase; K02304 precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:1.3.1.76 4.99.1.4]
Siroheme synthase N-terminal domain protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7I9_PALPW
Siroheme synthase N-terminal domain protein {ECO:0000313|EMBL:ADQ80683.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_100_curated_14
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16451..18145)
DNA (1695bp) protein (565aa)
sulfite reductase (nadph) beta subunit (EC:1.8.1.2); K00381 sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
Sulfite reductase [NADPH] hemoprotein beta-component {ECO:0000256|HAMAP-Rule:MF_01540}; Short=SiR-HP {ECO:0000256|HAMAP-Rule:MF_01540};; Short=SiRHP {ECO:0000256|HAMAP-Rule:MF_01540};; EC=1.8.1.2 {ECO:0000256|HAMAP-Rule:MF_01540};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Sulfite reductase [NADPH] hemoprotein beta-component n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7I8_PALPW
scnpilot_p_inoc_scaffold_100_curated_15
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18165..20084)
DNA (1920bp) protein (640aa)
sulfite reductase (nadph) flavoprotein, alpha chain; K00380 sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
Sulfite reductase [NADPH] flavoprotein alpha-component {ECO:0000256|SAAS:SAAS00014038}; EC=1.-.-.- {ECO:0000256|SAAS:SAAS00276386};; EC=1.8.1.2 {ECO:0000256|SAAS:SAAS00013953};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Sulfite reductase (NADPH) flavoprotein, alpha chain n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7I7_PALPW
scnpilot_p_inoc_scaffold_100_curated_16
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20144..20371)
DNA (228bp) protein (76aa)
Putative uncharacterized protein id=4522404 bin=GWC2_Syntrophobacterales_56_13 species=Sulfurimonas denitrificans genus=Sulfurimonas taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_100_curated_17
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20735..21883
DNA (1149bp) protein (383aa)
GDP-mannose 4,6-dehydratase (EC:4.2.1.47); K01711 GDPmannose 4,6-dehydratase [EC:4.2.1.47]
GDP-mannose 4,6-dehydratase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T130_PALPW
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_100_curated_18
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21886..22932
DNA (1047bp) protein (349aa)
gdp-L-fucose synthase (EC:1.1.1.271); K02377 GDP-L-fucose synthase [EC:1.1.1.271]
GDP-L-fucose synthase {ECO:0000256|HAMAP-Rule:MF_00956}; EC=1.1.1.271 {ECO:0000256|HAMAP-Rule:MF_00956};; GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase {ECO:0000256|HAMAP-Rule:MF_00956}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
GDP-L-fucose synthase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T129_PALPW
scnpilot_p_inoc_scaffold_100_curated_19
Psychroflexus torquis, Psychroflexus, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

23051..24196
DNA (1146bp) protein (382aa)
Lycopene cyclase n=1 Tax=Psychroflexus torquis (strain ATCC 700755 / ACAM 623) RepID=K4IEP4_PSYTT
lycopene cyclase
Lycopene cyclase {ECO:0000313|EMBL:AFU68333.1}; TaxID=313595 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Psychroflexus.;" source="Psychroflexus torquis (strain ATCC 700755 / ACAM 623).;"
scnpilot_p_inoc_scaffold_100_curated_20
Weeksella virosa, Weeksella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

24281..25261
DNA (981bp) protein (327aa)
UDP-glucose 4-epimerase (EC:5.1.3.2); K01784 UDP-glucose 4-epimerase [EC:5.1.3.2]
UDP-glucose 4-epimerase {ECO:0000313|EMBL:ADX67673.1}; EC=5.1.3.2 {ECO:0000313|EMBL:ADX67673.1};; TaxID=865938 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Weeksella.;" source="Weeksella virosa (strain ATCC 43766 / DSM 16922 / JCM 21250 / NBRC; 16016 / NCTC 11634 / CL345/78).;"
UDP-glucose 4-epimerase n=1 Tax=Weeksella virosa (strain ATCC 43766 / DSM 16922 / JCM 21250 / NBRC 16016 / NCTC 11634 / CL345/78) RepID=F0P1W3_WEEVC
scnpilot_p_inoc_scaffold_100_curated_21
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25273..26535
DNA (1263bp) protein (421aa)
UDP-glucose-6 dehydrogenase; K02474 UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.-]
UDP-glucose-6 dehydrogenase n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IWM7_9BACE
UDP-glucose-6 dehydrogenase {ECO:0000313|EMBL:EFI07030.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
scnpilot_p_inoc_scaffold_100_curated_22
Acinetobacter gerneri, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26545..27549
DNA (1005bp) protein (335aa)
Adenine deaminase {ECO:0000256|HAMAP-Rule:MF_01962}; Short=ADE {ECO:0000256|HAMAP-Rule:MF_01962};; EC=3.5.4.2 {ECO:0000256|HAMAP-Rule:MF_01962};; Adenine aminohydrolase {ECO:0000256|HAMAP-Rule:MF_01962}; TaxID=1120926 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter gerneri DSM 14967 = CIP 107464.;"
add; adenosine deaminase (EC:3.5.4.4); K01488 adenosine deaminase [EC:3.5.4.4]
Adenosine deaminase n=2 Tax=Acinetobacter gerneri RepID=N8YBF3_9GAMM
scnpilot_p_inoc_scaffold_100_curated_23
Draconibacterium sp. JN14CK-3, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27630..28361
DNA (732bp) protein (244aa)
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase (EC:2.7.8.6)
Sugar transferase n=1 Tax=Thiorhodococcus drewsii AZ1 RepID=G2E5I0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KJF43891.1}; TaxID=1544798 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium sp. JN14CK-3.;"
scnpilot_p_inoc_scaffold_100_curated_24
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28428..29231
DNA (804bp) protein (268aa)
Soluble ligand binding domain n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1G5_PALPW
soluble ligand binding domain; K01991 polysaccharide export outer membrane protein
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_100_curated_25
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29368..31749
DNA (2382bp) protein (794aa)
Capsular exopolysaccharide family n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1G6_PALPW
capsular exopolysaccharide family protein
Capsular exopolysaccharide family {ECO:0000313|EMBL:ADQ78560.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_100_curated_26
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31759..33852
DNA (2094bp) protein (698aa)
hypothetical protein n=1 Tax=Anaerophaga thermohalophila RepID=UPI0002DE29A4
polysaccharide transporter/flippase
Tax=GWE2_Bacteroidetes_40_63_curated
scnpilot_p_inoc_scaffold_100_curated_27
Chryseobacterium formosense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

33852..34949
DNA (1098bp) protein (366aa)
Cps21P n=1 Tax=Streptococcus suis RepID=M1VRF5_STRSU
Uncharacterized protein {ECO:0000313|EMBL:KFF00352.1}; TaxID=236814 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium formosense.;"
scnpilot_p_inoc_scaffold_100_curated_28
Bergeyella zoohelcum, Bergeyella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

34969..35865
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Bergeyella zoohelcum ATCC 43767 RepID=K1LTI5_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EKB55437.1}; TaxID=883096 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Bergeyella.;" source="Bergeyella zoohelcum ATCC 43767.;"
wcfE; glycosyltransferase
scnpilot_p_inoc_scaffold_100_curated_29
Odoribacter splanchnicus, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35881..36882
DNA (1002bp) protein (334aa)
Glycosyl transferase group 1 n=1 Tax=Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 / NCTC 10825 / 1651/6) RepID=F9Z744_ODOSD
glycosyl transferase group 1
Glycosyl transferase group 1 {ECO:0000313|EMBL:ADY34004.1}; TaxID=709991 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter.;" source="Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 /; NCTC 10825 / 1651/6) (Bacteroides splanchnicus).;"
scnpilot_p_inoc_scaffold_100_curated_30
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37613..39052
DNA (1440bp) protein (480aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1Z9_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ78743.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Displaying items 1-30 of 151 in total

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