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scnpilot_p_inoc_scaffold_37_curated

Search features with annotation key words

Displaying items 241-270 of 272 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_37_curated_241
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(324730..326301)
DNA (1572bp) protein (524aa)
Cation transporter id=4064363 bin=GWF2_Bacteroidetes_42_66 species=Zunongwangia profunda genus=Zunongwangia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
cation transporter; K03498 trk system potassium uptake protein TrkH
Tax=GWE2_Bacteroidetes_42_39_curated
scnpilot_p_inoc_scaffold_37_curated_242
unknown

Not on your lists

326428..326580
DNA (153bp) protein (51aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_37_curated_243
unknown

Not on your lists

326709..327389
DNA (681bp) protein (227aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_37_curated_244

Not on your lists

327689..331084
DNA (3396bp) protein (1132aa)
DNA helicase n=1 Tax=gut metagenome RepID=J9GRA7_9ZZZZ
DNA helicase {ECO:0000313|EMBL:EJX10962.1}; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
hypothetical protein
scnpilot_p_inoc_scaffold_37_curated_245
Parabacteroides sp. CAG:409, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

331123..331476
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. CAG:409 RepID=R7JLD3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDE63712.1}; TaxID=1262913 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:409.;"
hypothetical protein
scnpilot_p_inoc_scaffold_37_curated_246
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(331537..333876)
DNA (2340bp) protein (780aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VSQ9_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT92881.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_p_inoc_scaffold_37_curated_247
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(333898..337083)
DNA (3186bp) protein (1062aa)
TonB dependent receptor id=2021915 bin=GWD2_Bacteroidales_45_23 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
TonB-dependent receptor plug
Tax=GWC2_Bacteroidetes_46_850_curated
scnpilot_p_inoc_scaffold_37_curated_248
Draconibacterium sp. JN14CK-3, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(337432..338961)
DNA (1530bp) protein (510aa)
Uncharacterized protein {ECO:0000313|EMBL:KJF43697.1}; TaxID=1544798 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium sp. JN14CK-3.;"
iron-regulated transmembrane protein id=3382962 bin=GWF2_Bacteroidetes_40_13 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
putative iron-regulated transmembrane protein
scnpilot_p_inoc_scaffold_37_curated_249
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(339017..341236)
DNA (2220bp) protein (740aa)
nitric oxide reductase cytochrome b subunit; K04561 nitric oxide reductase subunit B [EC:1.7.2.5]
Cytochrome c oxidase subunit I n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XNE5_9BACT
Tax=GWA2_Bacteroidetes_31_9_curated
scnpilot_p_inoc_scaffold_37_curated_250
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(341300..341713)
DNA (414bp) protein (138aa)
Transcriptional regulator, BadM/Rrf2 family id=4161734 bin=GWF2_Bacteroidetes_41_31 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
hypothetical protein
Tax=GWF2_Bacteroidetes_41_31_curated
scnpilot_p_inoc_scaffold_37_curated_251
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

341875..342462
DNA (588bp) protein (196aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5J352_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGJ99896.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
quinol oxidase; K15876 cytochrome c-type protein
scnpilot_p_inoc_scaffold_37_curated_252
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

342540..344048
DNA (1509bp) protein (503aa)
Cytochrome c-552 {ECO:0000256|SAAS:SAAS00233541}; EC=1.-.-.- {ECO:0000256|SAAS:SAAS00275652};; EC=1.7.2.2 {ECO:0000256|SAAS:SAAS00233490};; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
Cytochrome c-552 n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X1Y7_9PORP
hypothetical protein
scnpilot_p_inoc_scaffold_37_curated_253
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

344086..345348
DNA (1263bp) protein (421aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5J349_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGJ99893.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
hypothetical protein
scnpilot_p_inoc_scaffold_37_curated_254
Bacteroides coprosuis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

345332..346177
DNA (846bp) protein (282aa)
Cytochrome c assembly protein n=1 Tax=Bacteroides coprosuis DSM 18011 RepID=F3ZU54_9BACE
Cytochrome c assembly protein {ECO:0000313|EMBL:EGJ71299.1}; TaxID=679937 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprosuis DSM 18011.;"
cytochrome c biogenesis protein CcsA
scnpilot_p_inoc_scaffold_37_curated_255
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(346197..346745)
DNA (549bp) protein (183aa)
Hemerythrin HHE cation binding domain protein id=4182242 bin=GWA2_Bacteroidetes_42_15 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
hemerythrin hhe cation binding domain protein
Tax=GWE2_Bacteroidetes_42_39_curated
scnpilot_p_inoc_scaffold_37_curated_256
GWF2_Lentisphaerae_38_69_curated, Lentisphaerae, Bacteria

Not on your lists

comp(346839..347792)
DNA (954bp) protein (318aa)
Putative SUA5-like translation factor id=4535689 bin=GWF2_Lentisphaerae_38_69 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Lentisphaerae_38_69 organism_group=Lentisphaerae organism_desc=a349
Putative SUA5-like translation factor; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein
Tax=GWF2_Lentisphaerae_38_69_curated
scnpilot_p_inoc_scaffold_37_curated_257
Nostoc sp. PCC 7120, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(347859..348944)
DNA (1086bp) protein (362aa)
Two-component hybrid sensor and regulator n=1 Tax=Nostoc sp. (strain PCC 7120 / UTEX 2576) RepID=Q8YXI2_NOSS1
two-component hybrid sensor and regulator rbh
Two-component hybrid sensor and regulator {ECO:0000313|EMBL:BAB73188.1}; TaxID=103690 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc sp. (strain PCC 7120 / UTEX 2576).;"
scnpilot_p_inoc_scaffold_37_curated_258
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(348948..350126)
DNA (1179bp) protein (393aa)
Multi-sensor signal transduction histidine kinase n=1 Tax=Crinalium epipsammum PCC 9333 RepID=K9W659_9CYAN
multi-sensor signal transduction histidine kinase
Tax=GWB2_Bacteroidetes_41_8_curated
scnpilot_p_inoc_scaffold_37_curated_259
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

350270..351253
DNA (984bp) protein (328aa)
aminodeoxychorismate synthase, subunit i (EC:2.6.1.85); K01665 para-aminobenzoate synthetase component I [EC:2.6.1.85]
Aminodeoxychorismate synthase, subunit I {ECO:0000313|EMBL:ADQ78212.1}; EC=2.6.1.85 {ECO:0000313|EMBL:ADQ78212.1};; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Aminodeoxychorismate synthase, subunit I n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0T7_PALPW
scnpilot_p_inoc_scaffold_37_curated_260
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

351237..351872
DNA (636bp) protein (212aa)
hypothetical protein; K02619 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0T8_PALPW
Uncharacterized protein {ECO:0000313|EMBL:ADQ78213.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_37_curated_261
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(351862..352941)
DNA (1080bp) protein (360aa)
3-isopropylmalate dehydrogenase (EC:1.1.1.85); K00052 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
3-isopropylmalate dehydrogenase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0U5_PALPW
scnpilot_p_inoc_scaffold_37_curated_262
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(352965..354500)
DNA (1536bp) protein (512aa)
(r)-citramalate synthase (EC:2.3.1.182); K09011 D-citramalate synthase [EC:2.3.1.182]
(R)-citramalate synthase {ECO:0000313|EMBL:ADQ78218.1}; EC=2.3.1.182 {ECO:0000313|EMBL:ADQ78218.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
(R)-citramalate synthase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0U3_PALPW
scnpilot_p_inoc_scaffold_37_curated_263
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(354514..355104)
DNA (591bp) protein (197aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
3-isopropylmalate dehydratase small subunit (EC:4.2.1.33); K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
3-isopropylmalate dehydratase small subunit n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IST4_9PORP
scnpilot_p_inoc_scaffold_37_curated_264
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(355155..356558)
DNA (1404bp) protein (468aa)
3-isopropylmalate dehydratase large subunit (EC:4.2.1.33); K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
3-isopropylmalate dehydratase large subunit {ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.- {ECO:0000256|SAAS:SAAS00274346};; EC=4.2.1.33 {ECO:0000256|SAAS:SAAS00091399};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
3-isopropylmalate dehydratase, large subunit n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0U0_PALPW
scnpilot_p_inoc_scaffold_37_curated_265
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(356594..358087)
DNA (1494bp) protein (498aa)
2-isopropylmalate synthase (EC:2.3.3.13); K01649 2-isopropylmalate synthase [EC:2.3.3.13]
2-isopropylmalate synthase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0T9_PALPW
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_37_curated_266
GWF2_Bacteroidetes_40_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(358319..359332)
DNA (1014bp) protein (338aa)
id=4284164 bin=GWF2_Bacteroidetes_40_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
hypothetical protein
Tax=GWF2_Bacteroidetes_40_14_curated
scnpilot_p_inoc_scaffold_37_curated_267
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

359634..361868
DNA (2235bp) protein (745aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K6A081_9PORP
TonB-dependent transmembrane receptor protein; K02014 iron complex outermembrane recepter protein
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_37_curated_268
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

361979..362926
DNA (948bp) protein (316aa)
cysteine synthase (EC:2.5.1.47); K01738 cysteine synthase A [EC:2.5.1.47]
Cysteine synthase {ECO:0000313|EMBL:ADQ80719.1}; EC=2.5.1.47 {ECO:0000313|EMBL:ADQ80719.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Cysteine synthase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7M5_PALPW
scnpilot_p_inoc_scaffold_37_curated_269
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

363028..364317
DNA (1290bp) protein (430aa)
O-acetylhomoserine sulfhydrolase (EC:2.5.1.47 2.5.1.49); K01740 O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
O-acetylhomoserine sulfhydrolase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7M4_PALPW
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_37_curated_270
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(364353..365768)
DNA (1416bp) protein (472aa)
Carbon starvation protein CstA n=1 Tax=Bacteroides sp. CAG:20 RepID=R5F212_9BACE
Carbon starvation protein CstA {ECO:0000313|EMBL:CCX94832.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
carbon starvation protein A
Displaying items 241-270 of 272 in total

View Taxonomy