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scnpilot_p_inoc_scaffold_21_curated

Search features with annotation key words

Displaying items 271-300 of 379 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_21_curated_271
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(337772..338887)
DNA (1116bp) protein (372aa)
DNA protecting protein DprA n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T647_PALPW
DNA protecting protein dpra; K04096 DNA processing protein
DNA protecting protein DprA {ECO:0000313|EMBL:ADQ80191.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_21_curated_272
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(338915..339301)
DNA (387bp) protein (129aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T646_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ80190.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_21_curated_273
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(339314..340981)
DNA (1668bp) protein (556aa)
ATPase AAA; K00876 uridine kinase [EC:2.7.1.48]
AAA ATPase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T6H1_PALPW
AAA ATPase {ECO:0000313|EMBL:ADQ80315.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_21_curated_274
Tannerella sp. 6_1_58FAA_CT1, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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341119..342918
DNA (1800bp) protein (600aa)
Putative uncharacterized protein n=1 Tax=Tannerella sp. 6_1_58FAA_CT1 RepID=G9S4P2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EHL84967.1}; TaxID=665949 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella sp. 6_1_58FAA_CT1.;"
Na/Pi-cotransporter II-like protein; K03324 phosphate:Na+ symporter
scnpilot_p_inoc_scaffold_21_curated_275
R_RIF_OD1_06_39_25, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

342996..343928
DNA (933bp) protein (311aa)
yrbG; Na+/ca+ antiporter, caca family protein; K07301 inner membrane protein
putative Na+/Ca+ antiporter id=3120285 bin=GWF2_Bacteroidetes_39_10 species=Bacillus pseudofirmus genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Bacteroidetes_39_10 organism_group=Bacteroidetes
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_06_39_25_curated
scnpilot_p_inoc_scaffold_21_curated_276
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

343977..345104
DNA (1128bp) protein (376aa)
aminotransferase class-iii; K00818 acetylornithine aminotransferase [EC:2.6.1.11]
Aminotransferase class-III n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T6H2_PALPW
Aminotransferase class-III {ECO:0000313|EMBL:ADQ80316.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_21_curated_277
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(345101..346105)
DNA (1005bp) protein (335aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T6H3_PALPW
nad-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ADQ80317.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_21_curated_278
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

346181..346759
DNA (579bp) protein (193aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T6H4_PALPW
hypothetical protein; K06966
Uncharacterized protein {ECO:0000313|EMBL:ADQ80318.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_21_curated_279
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

346766..347476
DNA (711bp) protein (237aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T6H5_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ80319.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_21_curated_280
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

347489..348244
DNA (756bp) protein (252aa)
uroporphyrinogeN-iii synthase; K01719 uroporphyrinogen-III synthase [EC:4.2.1.75]
Uroporphyrinogen-III synthase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T6H6_PALPW
Uroporphyrinogen-III synthase {ECO:0000313|EMBL:ADQ80320.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_21_curated_281
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

348252..348668
DNA (417bp) protein (139aa)
ribonuclease p protein component; K03536 ribonuclease P protein component [EC:3.1.26.5]
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 1
Ribonuclease P protein component n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T6H7_PALPW
scnpilot_p_inoc_scaffold_21_curated_282
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

348665..348892
DNA (228bp) protein (76aa)
Putative membrane protein insertion efficiency factor n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T6H8_PALPW
hypothetical protein; K08998 hypothetical protein
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_21_curated_283
Bacteroides sp. CAG:875, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

348906..349982
DNA (1077bp) protein (359aa)
Tetraacyldisaccharide 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093884}; EC=2.7.1.130 {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093878};; Lipid A 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409}; TaxID=1262752 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:875.;"
lipid-a-disaccharide kinase (EC:2.7.1.130); K00912 tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
Tetraacyldisaccharide 4'-kinase n=1 Tax=Bacteroides sp. CAG:875 RepID=R7ADI3_9BACE
scnpilot_p_inoc_scaffold_21_curated_284
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

349954..350760
DNA (807bp) protein (269aa)
purine nucleoside phosphorylase i, inosine and guanosine-specific; K03783 purine-nucleoside phosphorylase [EC:2.4.2.1]
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Purine nucleoside phosphorylase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T6I0_PALPW
scnpilot_p_inoc_scaffold_21_curated_285
Tannerella sp. 6_1_58FAA_CT1, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(350810..355174)
DNA (4365bp) protein (1455aa)
Putative uncharacterized protein n=1 Tax=Tannerella sp. 6_1_58FAA_CT1 RepID=G9S6W8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EHL82301.1}; TaxID=665949 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella sp. 6_1_58FAA_CT1.;"
two-component system sensor histidine kinase/response regulator rbh
scnpilot_p_inoc_scaffold_21_curated_286
Geofilum rubicundum, Geofilum, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

355370..356119
DNA (750bp) protein (250aa)
Uncharacterized protein {ECO:0000313|EMBL:GAO31616.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 15548.;"
scnpilot_p_inoc_scaffold_21_curated_287
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(356220..358937)
DNA (2718bp) protein (906aa)
Exo-poly-alpha-galacturonosidase (EC:3.2.1.82)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IYV1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK01498.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
scnpilot_p_inoc_scaffold_21_curated_288
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(358954..360318)
DNA (1365bp) protein (455aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003718768
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
scnpilot_p_inoc_scaffold_21_curated_289
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(360598..362343)
DNA (1746bp) protein (582aa)
signal peptide peptidase a; K04773 protease IV [EC:3.4.21.-]
Signal peptide peptidase A n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T6E1_PALPW
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_21_curated_290
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

362480..364384
DNA (1905bp) protein (635aa)
M6 family metalloprotease domain protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T6E3_PALPW
m6 family metalloprotease domain protein
M6 family metalloprotease domain protein {ECO:0000313|EMBL:ADQ80287.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_21_curated_291
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(364386..365039)
DNA (654bp) protein (218aa)
uracil phosphoribosyltransferase (EC:2.4.2.9); K00761 uracil phosphoribosyltransferase [EC:2.4.2.9]
Uracil phosphoribosyltransferase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T644_PALPW
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_21_curated_292
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(365045..365845)
DNA (801bp) protein (267aa)
pyrroline-5-carboxylate reductase (EC:1.5.1.2); K00286 pyrroline-5-carboxylate reductase [EC:1.5.1.2]
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Pyrroline-5-carboxylate reductase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T606_PALPW
scnpilot_p_inoc_scaffold_21_curated_293
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(365888..368314)
DNA (2427bp) protein (809aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T607_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ80151.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_21_curated_294
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(368311..369201)
DNA (891bp) protein (297aa)
Tyrosine recombinase XerC n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T608_PALPW
tyrosine recombinase xerd subunit; K04763 integrase/recombinase XerD
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_21_curated_295
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

369337..370107
DNA (771bp) protein (257aa)
S1/P1 nuclease n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T609_PALPW
s1/p1 nuclease
S1/P1 nuclease {ECO:0000313|EMBL:ADQ80153.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_21_curated_296
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

370169..370996
DNA (828bp) protein (276aa)
Thioredoxin domain-containing protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1Z2_PALPW
thioredoxin domaiN-containing protein
Thioredoxin domain-containing protein {ECO:0000313|EMBL:ADQ78736.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_21_curated_297
Prevotella sp. CAG:755, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

371006..371953
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Prevotella sp. CAG:755 RepID=R5GFY6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCY16335.1}; TaxID=1262935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:755.;"
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
scnpilot_p_inoc_scaffold_21_curated_298
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

371974..374316
DNA (2343bp) protein (781aa)
Sodium/hydrogen exchanger n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T6K7_PALPW
sodium/hydrogen exchanger
Sodium/hydrogen exchanger {ECO:0000313|EMBL:ADQ80351.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_21_curated_299
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

374521..375600
DNA (1080bp) protein (360aa)
Transcriptional regulator, LacI family n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1X7_PALPW
transcriptional regulator, laci family; K02529 LacI family transcriptional regulator
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ADQ78721.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_21_curated_300
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

375620..376867
DNA (1248bp) protein (416aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003825A37
hypothetical protein
Tax=GWB2_Bacteroidetes_41_8_curated
Displaying items 271-300 of 379 in total

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