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scnpilot_p_inoc_scaffold_21_curated

Search features with annotation key words

Displaying items 331-360 of 379 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_21_curated_331
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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425552..426400
DNA (849bp) protein (283aa)
Rod shape-determining protein MreC n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T651_PALPW
rod shape-determining protein mrec; K03570 rod shape-determining protein MreC
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_21_curated_332
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

426403..426906
DNA (504bp) protein (168aa)
Rod shape-determining protein MreD n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T652_PALPW
rod shape-determining protein mred
Rod shape-determining protein MreD {ECO:0000313|EMBL:ADQ80196.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_21_curated_333
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

426903..428738
DNA (1836bp) protein (612aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129); K05515 penicillin-binding protein 2
Peptidoglycan glycosyltransferase {ECO:0000313|EMBL:ADQ80197.1}; EC=2.4.1.129 {ECO:0000313|EMBL:ADQ80197.1};; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Peptidoglycan glycosyltransferase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T653_PALPW
scnpilot_p_inoc_scaffold_21_curated_334
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

428722..430179
DNA (1458bp) protein (486aa)
Cell cycle protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T654_PALPW
cell cycle protein; K05837 rod shape determining protein RodA
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_21_curated_335
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(430245..432302)
DNA (2058bp) protein (686aa)
Heat shock protein Hsp90 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T526_PALPW
heat shock protein hsp90; K04079 molecular chaperone HtpG
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_21_curated_336
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

432522..434396
DNA (1875bp) protein (625aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T683_PALPW
glucose inhibited division protein a; K03495 tRNA uridine 5-carboxymethylaminomethyl modification enzyme
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_21_curated_337
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

434466..436286
DNA (1821bp) protein (607aa)
UvrABC system protein C n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T682_PALPW
excinuclease ABC subunit c; K03703 excinuclease ABC subunit C
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_21_curated_338
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

436378..436794
DNA (417bp) protein (139aa)
Uncharacterized protein family UPF0079, ATPase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T681_PALPW
hypothetical protein; K06925 UPF0079 ATP-binding protein
Uncharacterized protein family UPF0079, ATPase {ECO:0000313|EMBL:ADQ80225.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_21_curated_339
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(436791..437810)
DNA (1020bp) protein (340aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
tRNA-dihydrouridine synthase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T678_PALPW
tRNA-u20-dihydrouridine synthase
scnpilot_p_inoc_scaffold_21_curated_340
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

437871..438800
DNA (930bp) protein (310aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T677_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ80221.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_21_curated_341
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

438797..440047
DNA (1251bp) protein (417aa)
collagenase; K08303 putative protease [EC:3.4.-.-]
Collagenase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T676_PALPW
Collagenase {ECO:0000313|EMBL:ADQ80220.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_21_curated_342
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(440131..441063)
DNA (933bp) protein (311aa)
quinolinate synthetase a (EC:2.5.1.72); K03517 quinolinate synthase [EC:2.5.1.72]
Quinolinate synthase A {ECO:0000256|HAMAP-Rule:MF_00568}; EC=2.5.1.72 {ECO:0000256|HAMAP-Rule:MF_00568};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Quinolinate synthase A n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T673_PALPW
scnpilot_p_inoc_scaffold_21_curated_343
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

441476..442432
DNA (957bp) protein (319aa)
nad-dependent epimerase/dehydratase; K00091 dihydroflavonol-4-reductase [EC:1.1.1.219]
NAD-dependent epimerase/dehydratase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T671_PALPW
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ADQ80215.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_21_curated_344
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(442466..444658)
DNA (2193bp) protein (731aa)
Putative uncharacterized protein id=4554514 bin=GWF2_Bacteroidetes_43_11 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
hypothetical protein
Tax=GWF2_Bacteroidetes_43_11_curated
scnpilot_p_inoc_scaffold_21_curated_345
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

445140..445979
DNA (840bp) protein (280aa)
PASTA domain containing protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T667_PALPW
pasta domain containing protein
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_21_curated_346
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

445999..447099
DNA (1101bp) protein (367aa)
ribosomal large subunit pseudouridine synthase d (EC:5.4.99.-); K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Pseudouridine synthase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T666_PALPW
scnpilot_p_inoc_scaffold_21_curated_347
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

447108..448076
DNA (969bp) protein (323aa)
d-alanine--d-alanine ligase (EC:6.3.2.4); K01921 D-alanine-D-alanine ligase [EC:6.3.2.4]
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
D-alanine--D-alanine ligase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T665_PALPW
scnpilot_p_inoc_scaffold_21_curated_348
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

448089..449063
DNA (975bp) protein (325aa)
polyprenyl synthetase; K13789 geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
Polyprenyl synthetase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T664_PALPW
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_21_curated_349
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

449068..449784
DNA (717bp) protein (239aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T663_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ80207.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_21_curated_350
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(449759..450373)
DNA (615bp) protein (205aa)
5-formyltetrahydrofolate cyclO-ligase; K01934 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T662_PALPW
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_21_curated_351
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(450383..451117)
DNA (735bp) protein (245aa)
hypothetical protein n=1 Tax=Thermophagus xiamenensis RepID=UPI000255CC52
putative lipoprotein
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_21_curated_352
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

451171..451983
DNA (813bp) protein (271aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T661_PALPW
hypothetical protein
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_21_curated_353
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

452010..454028
DNA (2019bp) protein (673aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T660_PALPW
hypothetical protein
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_21_curated_354
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

454114..455109
DNA (996bp) protein (332aa)
phosphotransacetylase (EC:2.3.1.8); K00625 phosphate acetyltransferase [EC:2.3.1.8]
Phosphotransacetylase {ECO:0000313|EMBL:ADQ80203.1}; EC=2.3.1.8 {ECO:0000313|EMBL:ADQ80203.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Phosphotransacetylase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T659_PALPW
scnpilot_p_inoc_scaffold_21_curated_355
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

455135..456091
DNA (957bp) protein (319aa)
3-hydroxyacyl-CoA dehydrogenase; K00074 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T658_PALPW
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein {ECO:0000313|EMBL:ADQ80202.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_21_curated_356
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

456106..457305
DNA (1200bp) protein (400aa)
acetate kinase (EC:2.7.2.1); K00925 acetate kinase [EC:2.7.2.1]
Acetate kinase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T656_PALPW
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_21_curated_357
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(457354..458097)
DNA (744bp) protein (248aa)
6-phosphogluconolactonase; K01057 6-phosphogluconolactonase [EC:3.1.1.31]
6-phosphogluconolactonase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T6R3_PALPW
6-phosphogluconolactonase {ECO:0000313|EMBL:ADQ80407.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_21_curated_358
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(458159..459664)
DNA (1506bp) protein (502aa)
glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49); K00036 glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49]
Glucose-6-phosphate 1-dehydrogenase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T6R2_PALPW
Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_21_curated_359
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(459736..460605)
DNA (870bp) protein (290aa)
Peptidase M23 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T729_PALPW
peptidase m23
Peptidase M23 {ECO:0000313|EMBL:ADQ80523.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_p_inoc_scaffold_21_curated_360
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(460630..460980)
DNA (351bp) protein (117aa)
Nucleoside diphosphate kinase {ECO:0000256|RuleBase:RU004013}; EC=2.7.4.6 {ECO:0000256|RuleBase:RU004013};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
ndk; nucleoside diphosphate kinase; K00940 nucleoside-diphosphate kinase [EC:2.7.4.6]
Nucleoside diphosphate kinase n=2 Tax=Bacteroides caccae RepID=A5ZKK3_9BACE
Displaying items 331-360 of 379 in total

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