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scnpilot_p_inoc_scaffold_21_curated_339

Organism: scnpilot_dereplicated_Paludibacter_1

near complete RP 51 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(436791..437810)

Top 3 Functional Annotations

Value Algorithm Source
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.5
  • Coverage: 337.0
  • Bit_score: 532
  • Evalue 5.80e-148
tRNA-dihydrouridine synthase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T678_PALPW similarity UNIREF
DB: UNIREF100
  • Identity: 74.5
  • Coverage: 337.0
  • Bit_score: 532
  • Evalue 4.10e-148
tRNA-u20-dihydrouridine synthase similarity KEGG
DB: KEGG
  • Identity: 74.5
  • Coverage: 337.0
  • Bit_score: 532
  • Evalue 1.30e-148

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Taxonomy

Paludibacter propionicigenes → Paludibacter → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1020
ATGAAAATAGGCACTATAGAATTTAAAGATCGTCCTTTGTTTCTGGCACCGATGGAGGATGTGACCGATCCGGCATTTCGTTTGATCTGCAAGCGTTTCGGAGCCGATATGTTGTATACCGAATTTGTTTCAGCCGATGCGTTGATTCGTAATATACCGCGAACCGAGCAAAAGTTGACGATACACGAAGAAGAACGTCCCATTGCTATACAAATTTACGGTCGCGATATTGATCCTTTGACCGAAGCGGCTAAAATAGCAGAAGCAGCAAAGGCCGATATTGTGGATATTAATTTTGGTTGTCCGGTAAAGAAGGTTGCCGGTAAAGGGGCAGGAGCGGGGCTGTTGAACGATATACCCAAGATGCTGGAAATTACTTCTTCGATAGTGAAAGCCGTAAATGTACCTGTAACTGTTAAGACGCGGCTGGGTTGGGACGATTCTTCCAAGGTAATTGTTGATTTGGCATTGCGTTTACAGGATTGTGGTATTGCAGCTCTTACAATTCATGGCCGTACGCGTTCGCAGATGTATAAGGGAGAGGCCGACTGGACCTTGATAGGTGCAGTGAAAAATCATCCGGGGATAAAAATTCCGATTATAGGGAACGGTGATGTTACTACTCCGGAGCGAGCCAAGTATAATTTCGATACTTATGGCGTAGATGCTGTCATGATAGGTCGCGGATCGATTGGCCGACCCTGGATTTTTTCCGAGATAAAACATTACTTTGAAACGGGTGAGTTAAAAGATCTTTTAACGTTTGAAGAAAAAAAAGCAATTTTAAAAGAGCATGTGATTGCCTCGGTTAGATGGCTCGATGTGGACGAGTCGGTTTCTATCGACGAAATAGCCGATCAACGTCTGAAAGGGATTATTCACAGTCGCCGGCACTTAGCTGCCACACCCGTATTCAAAGGCATTCCCAACTTTAAAGAAACCAGGATTGAAATGTTAAGAGCCGACACCATCAATCAGTTGTTTGCTATACTTGATAATATAGAGGAACCGGTTCTTTAA
PROTEIN sequence
Length: 340
MKIGTIEFKDRPLFLAPMEDVTDPAFRLICKRFGADMLYTEFVSADALIRNIPRTEQKLTIHEEERPIAIQIYGRDIDPLTEAAKIAEAAKADIVDINFGCPVKKVAGKGAGAGLLNDIPKMLEITSSIVKAVNVPVTVKTRLGWDDSSKVIVDLALRLQDCGIAALTIHGRTRSQMYKGEADWTLIGAVKNHPGIKIPIIGNGDVTTPERAKYNFDTYGVDAVMIGRGSIGRPWIFSEIKHYFETGELKDLLTFEEKKAILKEHVIASVRWLDVDESVSIDEIADQRLKGIIHSRRHLAATPVFKGIPNFKETRIEMLRADTINQLFAILDNIEEPVL*