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scnpilot_p_inoc_scaffold_310_curated_71

Organism: scnpilot_dereplicated_Paludibacter_1

near complete RP 51 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(62682..62981)

Top 3 Functional Annotations

Value Algorithm Source
Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T562_PALPW similarity UNIREF
DB: UNIREF100
  • Identity: 71.7
  • Coverage: 99.0
  • Bit_score: 150
  • Evalue 7.60e-34
sigma 54 modulation protein/ribosomal protein s30ea; K05808 putative sigma-54 modulation protein similarity KEGG
DB: KEGG
  • Identity: 71.7
  • Coverage: 99.0
  • Bit_score: 150
  • Evalue 2.40e-34
Sigma 54 modulation protein/ribosomal protein S30EA {ECO:0000313|EMBL:ADQ79856.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.7
  • Coverage: 99.0
  • Bit_score: 150
  • Evalue 1.10e-33

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Taxonomy

Paludibacter propionicigenes → Paludibacter → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 300
ATGAAACTGCGAGTTCAGTCAATTAACTTTGACGCGACGAAGGCTCTTGAAGCCCATGTGGAAAAAAAGACATCAAAACTGAAACGGTTTTTTGATGAAATCATGAATGTGGAGGTTTATCTGAAGGTTGTAAAGCCCGAAACTGCGACCAATAAGGAGGCGGAAATCAAGATTTCGGTGCCTGCCGGCGAATTTTTCGCATCCAAAATATGCGATACATTTGAAGAAGCAGTTGATTTATCGGTTGATGCACTGGAGAAACAGATCATGAAGCACAAGGAAAAACTAAGTAAAAAATAA
PROTEIN sequence
Length: 100
MKLRVQSINFDATKALEAHVEKKTSKLKRFFDEIMNVEVYLKVVKPETATNKEAEIKISVPAGEFFASKICDTFEEAVDLSVDALEKQIMKHKEKLSKK*