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scnpilot_p_inoc_scaffold_1717_curated

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1717_curated_1
unknown

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2..436
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Woodsholea maritima RepID=UPI0003759154
scnpilot_p_inoc_scaffold_1717_curated_2
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

433..1011
DNA (579bp) protein (193aa)
flagellar L-ring protein n=1 Tax=Sphingomonas elodea RepID=UPI0002631387
Uncharacterized protein {ECO:0000313|EMBL:AHE55656.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
flagellar L-ring protein; K02393 flagellar L-ring protein precursor FlgH
scnpilot_p_inoc_scaffold_1717_curated_3
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1011..2132
DNA (1122bp) protein (374aa)
flagellar basal body P-ring protein n=1 Tax=Sphingomonas elodea RepID=UPI0002631386
Flagellar P-ring protein {ECO:0000256|HAMAP-Rule:MF_00416}; Basal body P-ring protein {ECO:0000256|HAMAP-Rule:MF_00416}; Flags: Precursor;; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
flgI; Flagellar P-ring protein 1 precursor (Basal body P-ring protein 1)
scnpilot_p_inoc_scaffold_1717_curated_4
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2145..2489
DNA (345bp) protein (115aa)
flagellar basal-body rod protein FlgB n=1 Tax=Sphingomonas elodea RepID=UPI0002631385
Uncharacterized protein {ECO:0000313|EMBL:AHE55654.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
scnpilot_p_inoc_scaffold_1717_curated_5
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2489..2908
DNA (420bp) protein (140aa)
flagellar basal-body rod protein FlgC n=1 Tax=Sphingomonas elodea RepID=UPI0002631384
Flagellar basal-body rod protein FlgC {ECO:0000256|RuleBase:RU362062}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
flagellar basal-body rod protein FlgC; K02388 flagellar basal-body rod protein FlgC
scnpilot_p_inoc_scaffold_1717_curated_6
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2905..3225
DNA (321bp) protein (107aa)
flagellar hook-basal body complex protein FliE n=1 Tax=Sphingomonas elodea RepID=UPI0002631383
Flagellar hook-basal body complex protein FliE {ECO:0000256|HAMAP-Rule:MF_00724, ECO:0000256|SAAS:SAAS00116622}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
FliE; flagellar hook-basal body protein; K02408 flagellar hook-basal body complex protein FliE
scnpilot_p_inoc_scaffold_1717_curated_7
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3229..4416
DNA (1188bp) protein (396aa)
flagellar M-ring protein FliF n=1 Tax=Sphingomonas elodea RepID=UPI0002631382
Uncharacterized protein {ECO:0000313|EMBL:AHE55651.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
flagellar M-ring protein FliF; K02409 flagellar M-ring protein FliF
scnpilot_p_inoc_scaffold_1717_curated_8
unknown

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4406..4786
DNA (381bp) protein (127aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1717_curated_9
Burkholderia glumae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4783..5505
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Sphingomonas elodea RepID=UPI0002631381
Uncharacterized protein {ECO:0000313|EMBL:AJK45900.1}; TaxID=595500 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glumae PG1.;"
scnpilot_p_inoc_scaffold_1717_curated_10
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5502..6821
DNA (1320bp) protein (440aa)
fliI; ATPase FliI (EC:3.6.3.14); K02412 flagellum-specific ATP synthase [EC:3.6.3.14]
flagellar protein export ATPase FliI n=1 Tax=Sphingomonas elodea RepID=UPI0002631380
Uncharacterized protein {ECO:0000313|EMBL:AHE55648.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
scnpilot_p_inoc_scaffold_1717_curated_11
unknown

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6814..7269
DNA (456bp) protein (152aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1717_curated_12
unknown

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7266..8111
DNA (846bp) protein (282aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1717_curated_13
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8117..8560
DNA (444bp) protein (148aa)
flagellar hook capping protein n=1 Tax=Sphingomonas elodea RepID=UPI000263137F
Uncharacterized protein {ECO:0000313|EMBL:AHE55645.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
flagellar hook capping protein; K02389 flagellar basal-body rod modification protein FlgD
scnpilot_p_inoc_scaffold_1717_curated_14
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8562..9737
DNA (1176bp) protein (392aa)
Flagellar hook protein FlgE n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YQ33_9SPHN
Flagellar hook protein FlgE {ECO:0000313|EMBL:GAD50777.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1717_curated_15
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9734..10486
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A7Q3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD50778.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
scnpilot_p_inoc_scaffold_1717_curated_16
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10480..10758
DNA (279bp) protein (93aa)
Flagellar motor switch protein FliN n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZZG2_9SPHN
Flagellar motor switch protein FliN {ECO:0000313|EMBL:GAD50779.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
flagellar motor switch protein FliN; K02417 flagellar motor switch protein FliN/FliY
scnpilot_p_inoc_scaffold_1717_curated_17
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10761..11126
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YPD3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD50780.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
scnpilot_p_inoc_scaffold_1717_curated_18
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11123..11845
DNA (723bp) protein (241aa)
Flagellar biosynthetic protein FliP n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YBD6_9SPHN
Flagellar biosynthetic protein FliP {ECO:0000313|EMBL:GAD50781.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
flagellar biosynthetic protein FliP; K02419 flagellar biosynthetic protein FliP
scnpilot_p_inoc_scaffold_1717_curated_19
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11842..12633
DNA (792bp) protein (264aa)
RNA polymerase sigma factor n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YQ38_9SPHN
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
FliA/WhiG subfamily RNA polymerase sigma-28 subunit; K02405 RNA polymerase sigma factor for flagellar operon FliA
scnpilot_p_inoc_scaffold_1717_curated_20
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12644..13219
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A7Q8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD50783.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1717_curated_21
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13232..13582
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZZG8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD50784.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
scnpilot_p_inoc_scaffold_1717_curated_22
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13620..14126)
DNA (507bp) protein (169aa)
Lyase containing HEAT-repeat protein n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9C3S6_9SPHN
Lyase containing HEAT-repeat protein {ECO:0000313|EMBL:EIZ78120.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. Rr 2-17.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1717_curated_23
Sphingomonas sp. KA1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14195..14962)
DNA (768bp) protein (256aa)
Possible arsH protein n=1 Tax=Sphingomonas sp. KA1 RepID=Q0KJB9_9SPHN
Possible arsH protein {ECO:0000313|EMBL:BAF03423.1}; TaxID=164608 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. KA1.;"
NADPH-dependent FMN reductase
scnpilot_p_inoc_scaffold_1717_curated_24
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14962..15501)
DNA (540bp) protein (180aa)
Arsenical-resistance protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z742_9SPHN
Arsenical-resistance protein {ECO:0000313|EMBL:EGD59548.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
arsenical-resistance protein; K03325 arsenite transporter, ACR3 family
scnpilot_p_inoc_scaffold_1717_curated_25
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15562..16035)
DNA (474bp) protein (158aa)
Arsenical-resistance protein ACR3 n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MJ55_9SPHN
Arsenical-resistance protein ACR3 {ECO:0000313|EMBL:CCW16799.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;"
arsenical-resistance protein; K03325 arsenite transporter, ACR3 family
scnpilot_p_inoc_scaffold_1717_curated_26
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16046..16468)
DNA (423bp) protein (141aa)
arsenate reductase; K00537 arsenate reductase [EC:1.20.4.1]
Arsenate reductase n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MMU8_9SPHN
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
scnpilot_p_inoc_scaffold_1717_curated_27
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16484..16813)
DNA (330bp) protein (110aa)
Regulatory protein ArsR n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QV50_BREDI
ArsR family transcriptional regulator {ECO:0000313|EMBL:KDP71842.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
arsR; ArsR-family transcriptional regulator
scnpilot_p_inoc_scaffold_1717_curated_28
unknown

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comp(17294..17443)
DNA (150bp) protein (50aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1717_curated_29
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17554..18957
DNA (1404bp) protein (468aa)
S-adenosylhomocysteine deaminase n=1 Tax=Frankia sp. CN3 RepID=G6HGK9_9ACTO
Amidohydrolase {ECO:0000313|EMBL:AJP74277.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
putative hydrolase
scnpilot_p_inoc_scaffold_1717_curated_30
Citreicella sp. SE45, Citreicella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19660..19938
DNA (279bp) protein (93aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Citreicella sp. SE45 RepID=D0CYX5_9RHOB
Putative uncharacterized protein {ECO:0000313|EMBL:EEX17022.1}; Flags: Fragment;; TaxID=501479 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Citreicella.;" source="Citreicella sp. SE45.;"
hypothetical protein
Displaying items 1-30 of 34 in total

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