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scnpilot_p_inoc_scaffold_7012_curated_2

Organism: scnpilot_dereplicated_Sphingomonadales_1

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: 424..684

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S20 n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=RS20_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 84.9
  • Coverage: 86.0
  • Bit_score: 143
  • Evalue 8.10e-32
rpsT; 30S ribosomal protein S20; K02968 small subunit ribosomal protein S20 similarity KEGG
DB: KEGG
  • Identity: 84.9
  • Coverage: 86.0
  • Bit_score: 143
  • Evalue 2.50e-32
30S ribosomal protein S20 {ECO:0000255|HAMAP-Rule:MF_00500}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.9
  • Coverage: 86.0
  • Bit_score: 143
  • Evalue 1.10e-31

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Taxonomy

Novosphingobium aromaticivorans → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 261
ATGGCCAATACGCCGCAAGCACGCAAGCGCATCCGTCGCAACGCCAACCGGGCCGAAATCAACGGCGCCCGTCTAGGCCGCATCCGCACCTTCGTGAAGAAGGTGGAAGCCGCGATTGACGGCGGTGACAAGACCGCTGCCGCGGAAGCTCTCCGCAGCGCGCAGCCGGAACTGGCTCGCGGCGTCGCTCGCGGCGTACTGCACAAGAACACGGCGGCACGGAAGGTGTCGCGCCTGTCGAAGCGAATCGCCTCGCTCTGA
PROTEIN sequence
Length: 87
MANTPQARKRIRRNANRAEINGARLGRIRTFVKKVEAAIDGGDKTAAAEALRSAQPELARGVARGVLHKNTAARKVSRLSKRIASL*