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scnpilot_p_inoc_scaffold_1434_curated_2

Organism: scnpilot_dereplicated_Sphingomonadales_1

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(348..1397)

Top 3 Functional Annotations

Value Algorithm Source
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.7
  • Coverage: 350.0
  • Bit_score: 445
  • Evalue 9.60e-122
signal transduction histidine kinase, nitrogen specific, NtrB (EC:2.7.3.-); K07708 two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] similarity KEGG
DB: KEGG
  • Identity: 56.5
  • Coverage: 352.0
  • Bit_score: 392
  • Evalue 1.30e-106
Nitrogen regulation protein NtrB n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZZZ9_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 63.7
  • Coverage: 350.0
  • Bit_score: 445
  • Evalue 6.80e-122

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Taxonomy

Novosphingobium tardaugens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1050
GTGAGCGATGTTCCGCAGCCTTCGGAACAGCTGGCCAGCCTTTCCAGCGCTGTCCTGCTGCTGGGGCCGGGGCTGGTCATCAAGGGAGCGAACCCGGCGGCCGAACAACTTATCGGTATTGGGGCCAAGCGGCTTATCGGACGCAGGCTGGAAGACCTGGCACAGTTCGAGGAAGCCCGATTCTATGAATGGTTGGAGCGGGGAGATTCCCAGATTTCCGCGCTTTCGGTGAAGACCCGCATTGGCAATGCTGAACATAAGCTGGATCTGATCCTTTCACCAGTAATCGATCATCCCGGCTGGCAAATGCTGGCGATGAACGACGTCCGTGCAACCGAAACCTTGGGGGAAGGGGATGAGCCGCCTTTGCGCGCGCCTGCCATTCTTGCCCATGAGATTAAAAATCCCCTCTCCGCCATTCGCGGGGCAGCCCAATTGCTCGGGCGCAAGCTGTCGGACGGGGACAAAGCGCTGACCCAGCTAATCGCCGATGAGGTGGACCGCATCGCCAAGCTGGTCGACCGAATGCAATCGCTGGGACGGGAACAGCCTGAACCGGTCGCGCCATGCAATCTCCACGAAGTAATTCGTCGTGCAATCAATGTGTTTGAGGCACAAGGTGATAATGATGTTGAAATTCGCGAGGAATTTGATCCGTCATTGCCGCAGGTGCTCGGAAACGAAGACGCACTGGTTCAGGTACTGATCAACCTCATTTCCAACGCTCGTGACGCCTGCCGAAACGCCGAACATCCCCAGATCGTGATCCGCACACGCTTCGTTTCCGGTCTGGTACTGACGGCGCTGCGCCTCGGGCGTCCGGTGAAGTTGCCGATCGAGGTGCGGGTGAGCGACAATGGCTCGGGCATCGATCCGGCCCTGCGGGACCACATTTTCGAGCCTTTCGTCTCGTCAAAGAAGAATGGGCAGGGGCTTGGTCTCGCTCTGGTGAACAAGCTGGTGCGCGATATGGATGGCCGCATCAGCCACGAACGCGACGACACGGAAGGATGGACCCACTTCAAGGTCCATCTGCCGGTCGCGCGATAG
PROTEIN sequence
Length: 350
VSDVPQPSEQLASLSSAVLLLGPGLVIKGANPAAEQLIGIGAKRLIGRRLEDLAQFEEARFYEWLERGDSQISALSVKTRIGNAEHKLDLILSPVIDHPGWQMLAMNDVRATETLGEGDEPPLRAPAILAHEIKNPLSAIRGAAQLLGRKLSDGDKALTQLIADEVDRIAKLVDRMQSLGREQPEPVAPCNLHEVIRRAINVFEAQGDNDVEIREEFDPSLPQVLGNEDALVQVLINLISNARDACRNAEHPQIVIRTRFVSGLVLTALRLGRPVKLPIEVRVSDNGSGIDPALRDHIFEPFVSSKKNGQGLGLALVNKLVRDMDGRISHERDDTEGWTHFKVHLPVAR*