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scnpilot_p_inoc_scaffold_1434_curated_3

Organism: scnpilot_dereplicated_Sphingomonadales_1

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(1394..2422)

Top 3 Functional Annotations

Value Algorithm Source
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.8
  • Coverage: 333.0
  • Bit_score: 567
  • Evalue 1.60e-158
tRNA-dihydrouridine synthase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A879_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 83.8
  • Coverage: 333.0
  • Bit_score: 567
  • Evalue 1.20e-158
TIM-barrel fold family protein similarity KEGG
DB: KEGG
  • Identity: 82.4
  • Coverage: 330.0
  • Bit_score: 551
  • Evalue 2.10e-154

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Taxonomy

Novosphingobium tardaugens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1029
ATGACCCTTCCGACCCATACTCCCCGGCTAAGCCCGATCCAGATCGGCCCCGTGACGATCGATGTTCCGGTCGTCCTCGCGCCGATGACGGGCGTGACGGATATGCCGTTCCGCACGCTGGTGCGCCGCTATGGTTCAGGGCTTAACGTCACAGAGATGATTGCCAGCCCGGCAATGATCCGCGAAACACGCCAATCGCTGCAGAAGGCCGCCTGGCATCCGGTGGAAGAGCCGGTTTCCATGCAGCTCGTCGGTTGCACGCCAGCAGAAATGGGCGAGGCGGCTAAGCTGAATGAGGATCGTGGGGCCGCTATCATCGACATCAATATGGGCTGCCCGGTCAAAAAAGTTGTGAATGGCGATGCCGGCAGTGCCCTGATGCGCGATCTGCCCTTAGCCGCCCAGTTGATCGAGGCAACGGTGAAAGCCGTTTCCGTGCCGGTTACAGTGAAGATGCGCATGGGCTGGGATCATACGAGCCTGAACGCACCGGAACTCGCGCATATTGCCGAGGATCTCGGTGCTAAGATGATCACTGTCCACGGCCGCACACGCAATCAGATGTATAAGGGCGAAGCTGACTGGGCTTTCATTCGCAAGGTGAAGGAAGCCGTCTCGCTCCCTGTCATCGTGAATGGCGATATCTGCTGCGAGGAGGATGCAGGTACCGCGCTGGAGCAAAGCGGCGCGGATGGTGTGATGATCGGGCGCGGTGCCTATGGCAAGCCCTGGTTGCTGGGGCAGGTTATGCACTGGCTGCAAACCGGCGAGAAAGTCTCAACACCGGGCATTGCGGAGCAATATGCCGTGATTATAGAGCATTATAATGCGATGCTCGACCACTATGGCAGGGACACCGGCGTTAAAATCGCCCGCAAGCATCTTGGCTGGTACACCAAGGGGCTGCATGGTTCGGCCGATTTCCGCAACTTCGTCAACTTCATTGACGATGCCGATCAGGTGCTGAGCGAACTGGCCCGCTTTTACGAACCCTTCCTTGCCGAAGCCGAAGGACTGCGCGCCGCGTGA
PROTEIN sequence
Length: 343
MTLPTHTPRLSPIQIGPVTIDVPVVLAPMTGVTDMPFRTLVRRYGSGLNVTEMIASPAMIRETRQSLQKAAWHPVEEPVSMQLVGCTPAEMGEAAKLNEDRGAAIIDINMGCPVKKVVNGDAGSALMRDLPLAAQLIEATVKAVSVPVTVKMRMGWDHTSLNAPELAHIAEDLGAKMITVHGRTRNQMYKGEADWAFIRKVKEAVSLPVIVNGDICCEEDAGTALEQSGADGVMIGRGAYGKPWLLGQVMHWLQTGEKVSTPGIAEQYAVIIEHYNAMLDHYGRDTGVKIARKHLGWYTKGLHGSADFRNFVNFIDDADQVLSELARFYEPFLAEAEGLRAA*