ggKbase home page

scnpilot_p_inoc_scaffold_1434_curated_4

Organism: scnpilot_dereplicated_Sphingomonadales_1

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: 2500..3654

Top 3 Functional Annotations

Value Algorithm Source
ispDF; bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:2.7.7.60 4.6.1.12); K12506 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12] similarity KEGG
DB: KEGG
  • Identity: 66.0
  • Coverage: 382.0
  • Bit_score: 505
  • Evalue 1.90e-140
Bifunctional enzyme IspD/IspF n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YQJ7_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 70.6
  • Coverage: 377.0
  • Bit_score: 541
  • Evalue 7.70e-151
Bifunctional enzyme IspD/IspF {ECO:0000256|HAMAP-Rule:MF_01520, ECO:0000256|SAAS:SAAS00096235}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.6
  • Coverage: 377.0
  • Bit_score: 541
  • Evalue 1.10e-150

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium tardaugens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1155
ATGGTCGAGGCCAATCCCCTTCCCACTTTTGCCGCCGTGATCGTTGCCGCTGGAAAGGGTCTCCGTGCCGGTCAACCGCTGCCGAAGCAATTTGCGCCGTGGCGCGGCAAGGCAGTTTTGCGGCATTCGGCAGAAGCACTCGCGGCGGCCGGTGCGAACCCGATCCTTATCGCCATTCCCAACGGCGCGGATGAGATCGCAGGCCAGCTGCTCGCTGGGATTGAAGGCATTCGCTTGGTCACCGGTGCCGATACGCGGCAAGGTTCCGTTCGCACGGCGCTGGAGGAACTCGAAAGTTCAGCCCCGCAATTCGTGCTGATCCACGATGCAGCTCGCCCCGATCTGCCCGAGATAGTGATCGAGCGTCTCCTGCTGGCATTGCAGAGCCATCCCGGCGCCATTCCCGTTCTCCCGGTGGTGGACAGCCTCGCGGTCGAGGAAGATGGATTGATGGCAGGCAGCGCCCCACGTGAAGCCCTTCGGAGGGTACAGACCCCTCAGGCGTTCCGATATGCCGACATTCTTACCGCCCATCGCAGCTGGAGCGGTGCGGCGGAGGCTGGGGACGATGCACAGGTGCTTCGTGCCGCCGGAATGGCTGTGGAACTCGTCCCGGGTGACGAGGCGTTGCGCAAACTTACTTTCGCGGAGGATTTCATGGACGACCTGCCCTCGATGCGCATTGGCACCGGTTATGACGTCCATCGCCTTGCCGAGGGAGAGGAGCTTTGGTTGTGCGGTGTCCAGATCGAACATTCGATGGGGCTTGCCGGGCATAGCGATGCCGATGTGGCGATCCATGCCGCAGTTGATGCAATCCTCGGTGCGGTGGCGCTGGGCGATATCGGCCAGCACTTTCCGCCGAGCGATCCGCAGTGGCGGGGGGCGTCGTCAGACCGTTTCCTGGCCCATGCGCTTCATCTTGCCGCCGAAGCCGGGTATCGCCTCGGCAATCTAGACATCACGATCATCTGCGAAGCCCCCAAGATCGGACCCCATCGCGATCAAATGCGGCAGAAACTTGCCGAGATCGCAGGCGTTAACATTGGATGCATCAGCGTGAAGGCAACCACTACGGAGCGGCTCGGCTTTACCGGGCGTCGGGAAGGCATCGCCGCGCAGGCCGCAGCCTGTATGATCAGGCAAGCCCGATAG
PROTEIN sequence
Length: 385
MVEANPLPTFAAVIVAAGKGLRAGQPLPKQFAPWRGKAVLRHSAEALAAAGANPILIAIPNGADEIAGQLLAGIEGIRLVTGADTRQGSVRTALEELESSAPQFVLIHDAARPDLPEIVIERLLLALQSHPGAIPVLPVVDSLAVEEDGLMAGSAPREALRRVQTPQAFRYADILTAHRSWSGAAEAGDDAQVLRAAGMAVELVPGDEALRKLTFAEDFMDDLPSMRIGTGYDVHRLAEGEELWLCGVQIEHSMGLAGHSDADVAIHAAVDAILGAVALGDIGQHFPPSDPQWRGASSDRFLAHALHLAAEAGYRLGNLDITIICEAPKIGPHRDQMRQKLAEIAGVNIGCISVKATTTERLGFTGRREGIAAQAAACMIRQAR*