ggKbase home page

scnpilot_p_inoc_scaffold_715_curated_41

Organism: scnpilot_dereplicated_Sphingomonadales_1

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(38708..41842)

Top 3 Functional Annotations

Value Algorithm Source
hsdR; type I restriction enzyme EcoR124II R protein (EC:3.1.21.3); K01153 type I restriction enzyme, R subunit [EC:3.1.21.3] similarity KEGG
DB: KEGG
  • Identity: 75.6
  • Coverage: 999.99
  • Bit_score: 1619
  • Evalue 0.0
Type I site-specific deoxyribonuclease, HsdR family n=1 Tax=Pseudomonas sp. GM41(2012) RepID=J2ZML1_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 75.7
  • Coverage: 999.99
  • Bit_score: 1634
  • Evalue 0.0
Restriction endonuclease {ECO:0000313|EMBL:KGB53858.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.0
  • Coverage: 999.99
  • Bit_score: 1762
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingopyxis sp. LC81 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3135
ATGGTTGAGCAGACCAAGCCGATAGCGGAGTCGAAGAACTTCATCATTCTCGACAAATACACCAGCGATTGGACCGCTTCGGACCACTACCAGAGTGAGGCCGAGCTTGAGCGCGAGCTGATCAAGGACCTGCGCAATCAGGGCTACGCGTTCCTGCCTACGTTAACCTCATCCGAAGCCATGCTGGCCAATGTTCGTGAGCGGCTGGAAGACCTGAACAGCGTGCGCTTTTCCGATGAGGAATGGCAGCGCTTTGTCAGCACTTATCTGGACAATCCGAGCGACGGAGTCATCGACAAGACCCGCAAGGTACATGACGACTATATCCACGATTTCGTCTTCGATGATGGTCGCATCCAGAACATCTACCTTTTCGACAAGGCCAACATCGCGCGCAACAAGCTGCAGGTGATAAAGCAGTTTGAGCAGACCGGGCTGCACGCCAATCGCTATGACGTCACGATCCTCGTGAACGGCCTGCCACTGGTGCAGATCGAGCTGAAAAAGCGCGGTGTGGCAATTCGCGAGGCGTTCAACCAAATACACCGCTACAGCAAGGAAAGCTTCAACAGCGAGGCTTCGCTCTTCAAGTTCGTCCAGCTTTTCGTGATCTCGAATGGCACTGACACACGCTATTTTGCCAACACGACCAAGCGCGACAAGAACAGCTTCGACTTCACCATGAACTGGGCGAAGGCGGATAACACGCTGATCAAGGACCTGAAGGACTTCACCGCCACCTTCCTTGAGAAGACAACGCTGCTGAAAGTGCTGCTGCATTATTCGGTTTTTGACGTGAGTGACACGCTGCTGGTGATGCGCCCCTATCAGATTGCAGCAACCGAGCGCATCCTCTGGAAGATCAAAAGCTCCTATAACGCCAAGAGCTGGAGCAAGCCGGAAAGCGGAGGCTTCATCTGGCACACCACCGGATCAGGCAAGACGCTGACCAGCTTCAAAGCAGCGCGTCTGGCGACCGAGCTGGATTTCATCGACAAGGTGTTCTTCGTGGTCGACCGCAAGGACCTCGATTATCAGACGATGAAAGAATACCAGCGGTTCTCGCCCGATAGCGTCAATGGCTCGGAAAACACGGCAGCGCTCAAGCGTAATGTGGCCAAGAACGATCAGAAGATCATCGTTACCACGATCCAGAAGCTCAACAACCTGATGAAGAGCGAAGGCGACCTGTCTGTTTATGGCCAACAGGTGGTCTTCATTTTTGACGAATGCCACCGCAGCCAGTTTGGTGAGGCGCAGAGAAACCTGAAGAGGAAGTTCAAGCGTTTCTATCAGTTTGGTTTCACCGGCACGCCAATTTTCGGAGACGATATCGTTGATGGCAAACTGATCCGAAAGGGCAACGCTTCAGGGTCGGAAACGACCGCAAGTGTCTTTGGCCGCGAGTTGCACTCTTATGTCATCACTGACGCAATCCGGGATGAGAAGGTCCTGAAGTTCAAGGTCGATTATAACGACGTGAGGCCGAAGTTCCGGGCCATTGAGAAGGAGCAGGATGAGGCCAAGCTCAGCGCAGCTGAGAACAGGAAGGCCTTGTTGCACCCTGAGCGGATCAAAGAGGTTTCCCAGTACATTCTGACCAATTTTCGCCAGAAGACGCACCGGACAAATCCCGGAGGGCGGGGCTTCAACGCGATGTTCGCTGTCAGCAGCGTCGAGGCCGCAAAGCTCTATTACGAGACATTGAGAAAGCTTCAGGATGGCAACGAAAAGCCCATCAAAATCGCGACCATCTTCTCGTTTGCCGCAAACGAAGAGCAGAACGGTATCGGCGAAATCCGCGATGAGAGCTTCGACGTGTCAGCAATGGATAGCACCGGGAAGGAGTTCCTGAACGCTGTCATCCGCGACTACAACGCGACGTTCGGAACGAGCTTCAGCACCGACGGAAATGGCTTCCAGAACTATTACCGCGATCTCGCCAATCGCGTGAAATCTCAGGATGTCGACCTTCTAATCGTGGTCGGCATGTTTCTGACCGGCTTCGATGCGCCTGCGCTCAACACGCTCTTCGTCGATAAGAATTTGCGCTTCCATGGGCTAATTCAGGCCTATTCACGCACCAATCGCATCTTCGACGCGACCAAGACGTTTGGTAACATCGTGGCGTTTCGCGATTTGGAGCAGGCCACAATCGATGCAATCACCTTGTTTGGCGACAGCAACACGAAGAACGTGGTGCTCGAGAAGAGCTATAAGGAATACATGGAAGGCTTCTCGGACATTGCGTCCGGAGCGGCCAGCCGGGGCTTCAAGACGATCTTAGCCGAGCTTGAGCAGCGCTTCCCTGAGCCTAGCGAGATTATGAAGGAAGCGGACAAGAAGGCCTTTGCAAAGCTCTTTGGGGAGTTTCTTAAGGCAGAGAACGTGCTCCAAAATTTCGATGAGTATGTTGCGCTGAAGGCGTTTCAAAATGTCGACCAAGGTGATCCAGAAGCGGTTGAGGCCTTCAAAGCCGTTCATCACTTGGATGACGAGAAAGTTAGAGAACTAGCGTCGGTTACGCTTCCAGCCGAGCGAACGATCCAAGACTACAAGTCGACCTATAACGATATTCGCGACTGGTTGAGGCGGGAAAGGGAGGCCAAGGCCACCGAGGATTCCGCGCTTGATTGGGACGATGTCGCATTCGAAGTCGATCTGCTGAAGTCGCAGGAGATCAATCTCGACTACATTCTTGAGCTGATCTTTGCCAAAAATCGGGACGTTGAGGACAAAGGCGATTTGATCGAAGAAGCCCGACGCATCATCAGGGCGAGCTTAGGCAATCGGGCGAAGGAGAGCCTGATCGTCGATTTCATCAATCAGACGAATCTGGATGAGATCAACAGCAAAGCACAGATCATGGAGGCCTTTTACGAGTTTGCTCAAGGCGAGCAGCGCCGCGAGTTTGAAGAGCTTGTTCAAGCGGAAAATCTGAACGTTGAAGCAGCAAGGAGGTATGTTGCTAACTCAGTCAAGCGCGAGTTCGCGAGCGAAAATGGAAACGACCTAAACGACATCCTGCCCAAAATGAGTCCACTCAACCCTTCCTACCTCACCAAGAAGGCTTCGGTATTCCGACAGGTCACGGACTTCGTCGCGAAGTTCAAGGGCGTCGGCGGGCAAATCTGA
PROTEIN sequence
Length: 1045
MVEQTKPIAESKNFIILDKYTSDWTASDHYQSEAELERELIKDLRNQGYAFLPTLTSSEAMLANVRERLEDLNSVRFSDEEWQRFVSTYLDNPSDGVIDKTRKVHDDYIHDFVFDDGRIQNIYLFDKANIARNKLQVIKQFEQTGLHANRYDVTILVNGLPLVQIELKKRGVAIREAFNQIHRYSKESFNSEASLFKFVQLFVISNGTDTRYFANTTKRDKNSFDFTMNWAKADNTLIKDLKDFTATFLEKTTLLKVLLHYSVFDVSDTLLVMRPYQIAATERILWKIKSSYNAKSWSKPESGGFIWHTTGSGKTLTSFKAARLATELDFIDKVFFVVDRKDLDYQTMKEYQRFSPDSVNGSENTAALKRNVAKNDQKIIVTTIQKLNNLMKSEGDLSVYGQQVVFIFDECHRSQFGEAQRNLKRKFKRFYQFGFTGTPIFGDDIVDGKLIRKGNASGSETTASVFGRELHSYVITDAIRDEKVLKFKVDYNDVRPKFRAIEKEQDEAKLSAAENRKALLHPERIKEVSQYILTNFRQKTHRTNPGGRGFNAMFAVSSVEAAKLYYETLRKLQDGNEKPIKIATIFSFAANEEQNGIGEIRDESFDVSAMDSTGKEFLNAVIRDYNATFGTSFSTDGNGFQNYYRDLANRVKSQDVDLLIVVGMFLTGFDAPALNTLFVDKNLRFHGLIQAYSRTNRIFDATKTFGNIVAFRDLEQATIDAITLFGDSNTKNVVLEKSYKEYMEGFSDIASGAASRGFKTILAELEQRFPEPSEIMKEADKKAFAKLFGEFLKAENVLQNFDEYVALKAFQNVDQGDPEAVEAFKAVHHLDDEKVRELASVTLPAERTIQDYKSTYNDIRDWLRREREAKATEDSALDWDDVAFEVDLLKSQEINLDYILELIFAKNRDVEDKGDLIEEARRIIRASLGNRAKESLIVDFINQTNLDEINSKAQIMEAFYEFAQGEQRREFEELVQAENLNVEAARRYVANSVKREFASENGNDLNDILPKMSPLNPSYLTKKASVFRQVTDFVAKFKGVGGQI*