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SCNpilot_BF_INOC_Thiobacillus_strain1_63_62

SCNpilot_bf_inoc_Hydrogenophilales_63_61
In projects: SCNpilot_bf_inoc

Consensus taxonomy: Hydrogenophilales  →  Betaproteobacteria  →  Proteobacteria  →  Bacteria

Displaying items 101-150 of 340 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCNpilot_BF_INOC_scaffold_1985
Order: Hydrogenophilales (100%)
9 10234 bp 61.88 63.99 95.62
SCNpilot_BF_INOC_scaffold_1686
Species: Thiobacillus denitrificans (55.56%)
9 11353 bp 59.96 60.09 90.56
SCNpilot_BF_INOC_scaffold_2540
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (55.56%)
9 7695 bp 61.69 64.55 91.07
SCNpilot_BF_INOC_scaffold_4240
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (100%)
9 5872 bp 64.31 56.77 97.53
SCNpilot_BF_INOC_scaffold_14859
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (55.56%)
9 4967 bp 59.19 55.79 87.16
SCNpilot_BF_INOC_scaffold_4095
Order: Hydrogenophilales (55.56%)
9 8129 bp 61.84 60.15 91.38
SCNpilot_BF_INOC_scaffold_22703
Order: Hydrogenophilales (66.67%)
9 7418 bp 61.74 70.14 76.11
SCNpilot_BF_INOC_scaffold_3678
Order: Hydrogenophilales (100%)
9 7510 bp 64.07 65.21 93.52
SCNpilot_BF_INOC_scaffold_8384
Order: Hydrogenophilales (75%)
8 6858 bp 64.79 61.60 92.56
SCNpilot_BF_INOC_scaffold_5365
Order: Hydrogenophilales (75%)
8 8784 bp 63.64 58.58 89.11
SCNpilot_BF_INOC_scaffold_12136
Species: Thiobacillus denitrificans (50%)
8 6308 bp 61.32 54.67 86.08
SCNpilot_BF_INOC_scaffold_5869
Order: Hydrogenophilales (62.5%)
8 5802 bp 62.58 72.38 82.01
SCNpilot_BF_INOC_scaffold_3334
Order: Hydrogenophilales (75%)
8 9687 bp 61.51 59.31 89.72
SCNpilot_BF_INOC_scaffold_4812
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (50%)
8 5506 bp 58.63 55.30 87.45
SCNpilot_BF_INOC_scaffold_2805
Order: Hydrogenophilales (100%)
8 8412 bp 65.81 56.48 94.26
SCNpilot_BF_INOC_scaffold_16539
Order: Hydrogenophilales (50%)
8 5655 bp 55.33 37.11 69.66
SCNpilot_BF_INOC_scaffold_5982
Order: Hydrogenophilales (87.5%)
8 5003 bp 62.06 62.11 89.35
SCNpilot_BF_INOC_scaffold_7376
Class: Betaproteobacteria (75%)
8 6267 bp 62.07 65.76 73.00
SCNpilot_BF_INOC_scaffold_11972
Order: Hydrogenophilales (87.5%)
8 5515 bp 64.15 59.26 93.29
SCNpilot_BF_INOC_scaffold_3319
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (87.5%)
8 6561 bp 59.78 54.86 75.54
SCNpilot_BF_INOC_scaffold_5033
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (50%)
8 7786 bp 62.75 70.02 83.15
SCNpilot_BF_INOC_scaffold_2749
Species: GWE1_Thiobacillus_62_9_curated (62.5%)
8 7879 bp 62.75 57.66 98.73
SCNpilot_BF_INOC_scaffold_8088
Order: Hydrogenophilales (62.5%)
8 5577 bp 58.11 53.78 87.41
SCNpilot_BF_INOC_scaffold_3742
Order: Hydrogenophilales (87.5%)
8 8238 bp 62.10 57.07 89.99
SCNpilot_BF_INOC_scaffold_20601
Order: Hydrogenophilales (50%)
8 5216 bp 60.60 56.69 80.81
SCNpilot_BF_INOC_scaffold_3397
Class: Betaproteobacteria (75%)
8 7932 bp 61.40 63.26 88.92
SCNpilot_BF_INOC_scaffold_9956
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (50%)
8 6879 bp 61.23 57.83 82.25
SCNpilot_BF_INOC_scaffold_3054
Order: Hydrogenophilales (87.5%)
8 7028 bp 63.86 62.50 91.22
SCNpilot_BF_INOC_scaffold_9080
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (57.14%)
7 6327 bp 64.01 65.62 93.79
SCNpilot_BF_INOC_scaffold_6715
Order: Hydrogenophilales (85.71%)
7 4630 bp 59.18 56.33 80.86
SCNpilot_BF_INOC_scaffold_1701
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (57.14%)
7 11240 bp 63.83 61.68 92.22
SCNpilot_BF_INOC_scaffold_3201
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (85.71%)
7 6311 bp 60.89 66.62 86.23
SCNpilot_BF_INOC_scaffold_4519
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (71.43%)
7 4739 bp 62.48 70.55 93.25
SCNpilot_BF_INOC_scaffold_12430
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (57.14%)
7 4674 bp 63.44 68.47 95.25
SCNpilot_BF_INOC_scaffold_11071
Order: Hydrogenophilales (85.71%)
7 5519 bp 63.85 57.67 85.61
SCNpilot_BF_INOC_scaffold_7616
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (57.14%)
7 4073 bp 62.29 56.33 85.15
SCNpilot_BF_INOC_scaffold_3577
Order: Hydrogenophilales (85.71%)
7 6806 bp 62.72 69.44 96.36
SCNpilot_BF_INOC_scaffold_5844
Order: Hydrogenophilales (100%)
7 4346 bp 62.77 68.32 91.81
SCNpilot_BF_INOC_scaffold_3514
Order: Hydrogenophilales (85.71%)
7 6314 bp 59.60 54.18 78.78
SCNpilot_BF_INOC_scaffold_4097
Order: Hydrogenophilales (57.14%)
7 5906 bp 65.48 61.92 82.24
SCNpilot_BF_INOC_scaffold_4802
Order: Hydrogenophilales (71.43%)
7 4526 bp 61.93 72.76 92.27
SCNpilot_BF_INOC_scaffold_7495
Species: GWE1_Thiobacillus_62_9_curated (71.43%)
7 6380 bp 62.74 55.16 93.95
SCNpilot_BF_INOC_scaffold_7908
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (57.14%)
7 5632 bp 61.08 52.50 81.07
SCNpilot_BF_INOC_scaffold_9751
Species: GWE1_Thiobacillus_62_9_curated (100%)
7 4962 bp 64.87 73.55 77.81
SCNpilot_BF_INOC_scaffold_5863
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (66.67%)
6 6511 bp 58.18 65.00 84.69
SCNpilot_BF_INOC_scaffold_6071
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (50%)
6 3827 bp 61.77 62.50 87.25
SCNpilot_BF_INOC_scaffold_18127
Order: Hydrogenophilales (100%)
6 3608 bp 60.78 59.97 90.30
SCNpilot_BF_INOC_scaffold_6571
Order: Hydrogenophilales (66.67%)
6 7029 bp 63.10 58.35 94.84
SCNpilot_BF_INOC_scaffold_24831
Order: Hydrogenophilales (66.67%)
6 3971 bp 64.34 64.35 90.43
SCNpilot_BF_INOC_scaffold_23687
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (66.67%)
6 4467 bp 64.76 61.58 72.93
Displaying items 101-150 of 340 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.