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SCNpilot_BF_INOC_scaffold_17

Search features with annotation key words

Displaying items 241-270 of 744 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_17_241
Mageeibacillus indolicus, Mageeibacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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262362..262670
DNA (309bp) protein (103aa)
50S ribosomal protein L21 n=1 Tax=Clostridiales genomosp. BVAB3 (strain UPII9-5) RepID=D3R1F2_CLOB3
rplU; 50S ribosomal protein L21
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=699246 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Mageeibacillus.;" so
SCNpilot_BF_INOC_scaffold_17_242
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

262689..263030
DNA (342bp) protein (114aa)
Putative ribosomal protein n=1 Tax=Clostridium pasteurianum BC1 RepID=R4K1T5_CLOPA
putative ribosomal protein
Putative ribosomal protein {ECO:0000313|EMBL:AGK97047.1}; TaxID=86416 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum BC1.;"
SCNpilot_BF_INOC_scaffold_17_243
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


263024..263305
DNA (282bp) protein (94aa)
50S ribosomal protein L27 n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TQJ4_ALKMQ
rpmA; 50S ribosomal protein L27
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens
SCNpilot_BF_INOC_scaffold_17_244

Not on your lists

263409..264686
DNA (1278bp) protein (426aa)
GTPase Obg n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X7G0_9CLOT
GTPase obg {ECO:0000313|EMBL:ETJ16847.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
obg; GTPase Obg
SCNpilot_BF_INOC_scaffold_17_245
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

264699..265280
DNA (582bp) protein (194aa)
Putative RNA-binding protein, YhbY family n=1 Tax=Peptostreptococcus stomatis DSM 17678 RepID=E0E0X8_9FIRM
RNA-binding protein {ECO:0000313|EMBL:KJF27990.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_17_246
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

265277..266479
DNA (1203bp) protein (401aa)
Nicotinate-nucleotide adenylyltransferase {ECO:0000256|SAAS:SAAS00086517}; EC=2.7.7.18 {ECO:0000256|SAAS:SAAS00086517};; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="F
metal dependent phosphohydrolase (EC:2.7.7.18)
Nicotinate (Nicotinamide) nucleotide adenylyltransferase n=1 Tax=Clostridium sp. ASF356 RepID=N1ZJZ2_9CLOT
SCNpilot_BF_INOC_scaffold_17_247
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

266487..266828
DNA (342bp) protein (114aa)
Ribosomal silencing factor RsfS n=1 Tax=Clostridium termitidis CT1112 RepID=S0FLX7_9CLOT
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] t
iojap family protein
SCNpilot_BF_INOC_scaffold_17_248
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

266909..267550
DNA (642bp) protein (214aa)
YheO domain protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TQK4_ALKMQ
Uncharacterized protein {ECO:0000313|EMBL:KJF27997.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
YheO domain-containing protein
SCNpilot_BF_INOC_scaffold_17_249
Pyrococcus furiosus, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

267570..267953
DNA (384bp) protein (128aa)
Enamine/imine deaminase n=2 Tax=Pyrococcus furiosus RepID=RIDA_PYRFU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFN03461.1}; TaxID=1185654 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus furiosus COM1.;"
SCNpilot_BF_INOC_scaffold_17_250
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(268040..269371)
DNA (1332bp) protein (444aa)
serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4)
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TQK8_ALKMQ
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:KGG80178.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacte
SCNpilot_BF_INOC_scaffold_17_251
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

269491..269934
DNA (444bp) protein (148aa)
DNA uptake-like protein n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AIJ2_IGNAJ
DNA uptake-like protein
Uncharacterized protein {ECO:0000313|EMBL:KEZ88640.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
SCNpilot_BF_INOC_scaffold_17_252
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

270083..271027
DNA (945bp) protein (315aa)
Selenide, water dikinase {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883}; EC=2.7.9.3 {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883};; Selenium donor protein {ECO:000
Selenide, water dikinase n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TQL0_ALKMQ
selenide, water dikinase
SCNpilot_BF_INOC_scaffold_17_253
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

271069..272460
DNA (1392bp) protein (464aa)
L-seryl-tRNA(Sec) selenium transferase {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029253}; EC=2.9.1.1 {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029254};; Selenocysteine sy
L-seryl-tRNA(Sec) selenium transferase n=1 Tax=Clostridium colicanis 209318 RepID=N9Y200_9CLOT
selenocysteine synthase
SCNpilot_BF_INOC_scaffold_17_254
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

272460..274325
DNA (1866bp) protein (622aa)
selB; selenocysteine-specific translation elongation factor SelB (EC:2.7.7.4)
Selenocysteine-specific translation elongation factor n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VVC5_CLOBI
Selenocysteine-specific translation elongation factor {ECO:0000313|EMBL:EQK45398.1}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;"
SCNpilot_BF_INOC_scaffold_17_255
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

274294..275043
DNA (750bp) protein (250aa)
Phosphate regulon transcriptional regulatory protein PhoB (SphR) n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1ARM2_9CLOT
PhoP family transcriptional regulator {ECO:0000313|EMBL:KGG80171.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobac
two component transcriptional regulator
SCNpilot_BF_INOC_scaffold_17_256
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

275096..276436
DNA (1341bp) protein (447aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacte
histidine kinase (EC:2.7.13.3)
Histidine kinase n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MHJ1_ALKOO
SCNpilot_BF_INOC_scaffold_17_257
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

276449..277321
DNA (873bp) protein (291aa)
Spore germination protein {ECO:0000313|EMBL:EOC99795.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritima
hypothetical protein
Lipoprotein LpqB, GerMN domain protein id=1898656 bin=GWD2_Clostridiales_32_59 species=Mahella australiensis genus=Mahella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Clostridiales_32_59 organism_group=Firmicute organism_desc=a65
SCNpilot_BF_INOC_scaffold_17_258
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

277413..279083
DNA (1671bp) protein (557aa)
Chitinase n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VPK3_CLOSH
Uncharacterized protein {ECO:0000313|EMBL:KJF27062.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_17_259
unknown

Not on your lists

comp(279127..279279)
DNA (153bp) protein (51aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_17_260
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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279448..279768
DNA (321bp) protein (107aa)
UPF0145 protein HMPREF1141_0208 n=1 Tax=Clostridium sp. MSTE9 RepID=J0X1Q4_9CLOT
UPF0145 protein HMPREF1141_0208 {ECO:0000256|HAMAP-Rule:MF_00338}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.
hypothetical protein
SCNpilot_BF_INOC_scaffold_17_261
BJP_IG2069_Clostridiales_42_11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(279810..280406)
DNA (597bp) protein (199aa)
Glycerol-3-phosphate acyltransferase n=1 Tax=Thermoanaerobacterium saccharolyticum (strain DSM 8691 / JW/SL-YS485) RepID=I3VVQ7_THESW
Glycerol-3-phosphate acyltransferase
Tax=BJP_IG2069_Clostridiales_42_11
SCNpilot_BF_INOC_scaffold_17_262
Carboxydothermus hydrogenoformans, Carboxydothermus, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

280520..281428
DNA (909bp) protein (303aa)
Hydrolase, alpha/beta fold family n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3ADP4_CARHZ
alpha/beta hydrolase
Hydrolase, alpha/beta fold family {ECO:0000313|EMBL:ABB14808.1}; TaxID=246194 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Carboxydothermus.;" source="Ca
SCNpilot_BF_INOC_scaffold_17_263
Thermoanaerobacterium thermosaccharolyticum, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(281498..282715)
DNA (1218bp) protein (406aa)
Alanyl-tRNA synthetase n=1 Tax=Thermoanaerobacterium thermosaccharolyticum M0795 RepID=L0IJ34_THETR
alanyl-tRNA synthetase
Alanyl-tRNA synthetase {ECO:0000313|EMBL:AGB18769.1}; TaxID=698948 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermoanaerobac
SCNpilot_BF_INOC_scaffold_17_264
ACD4, Gracilibacteria, Bacteria

Not on your lists

282799..283689
DNA (891bp) protein (297aa)
seg 189..200 Tax=ACD4
SCNpilot_BF_INOC_scaffold_17_265
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

283745..285448
DNA (1704bp) protein (568aa)
Putative uncharacterized protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TSN6_ALKMQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR49204.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens (stra
SCNpilot_BF_INOC_scaffold_17_266
Peptoniphilus sp. oral taxon 386, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

285494..287614
DNA (2121bp) protein (707aa)
competence protein ComEC n=1 Tax=Anaerococcus sp. PH9 RepID=UPI00030DE8EA
DNA internalization competence protein ComEC/Rec2-like protein {ECO:0000313|EMBL:EFI42402.1}; TaxID=575609 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;"
DNA internalization-related competence protein ComEC/Rec2
SCNpilot_BF_INOC_scaffold_17_267
ACD4, Gracilibacteria, Bacteria

Not on your lists

287676..288689
DNA (1014bp) protein (338aa)
DNA polymerase III, delta subunit; K02340 DNA polymerase III subunit delta [EC:2.7.7.7] Tax=ACD4
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FYW4_9BACT
DNA polymerase III subunit delta
SCNpilot_BF_INOC_scaffold_17_268
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(288836..289102)
DNA (267bp) protein (89aa)
30S ribosomal protein S20 n=2 Tax=Clostridiales RepID=E0QLG9_9FIRM
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter b
rpsT; 30S ribosomal protein S20
SCNpilot_BF_INOC_scaffold_17_269
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

289299..291110
DNA (1812bp) protein (604aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP
Elongation factor 4 n=1 Tax=Filifactor alocis (strain ATCC 35896 / D40 B5) RepID=D6GR22_FILAD
GTP-binding protein LepA
SCNpilot_BF_INOC_scaffold_17_270
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

291183..292334
DNA (1152bp) protein (384aa)
hemN; oxygen-independent coproporphyrinogen-III oxidase 1 (EC:1.3.99.22)
Oxygen-independent coproporphyrinogen-III oxidase 1 {ECO:0000313|EMBL:AFS78837.1}; EC=1.3.99.22 {ECO:0000313|EMBL:AFS78837.1};; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales;
Oxygen-independent coproporphyrinogen-III oxidase 1 n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B187_CLOA9
Displaying items 241-270 of 744 in total

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