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SCNpilot_BF_INOC_scaffold_17_247

Organism: SCNpilot_BF_INOC_Clostridium_37_18

near complete RP 48 / 55 MC: 5 BSCG 50 / 51 MC: 4 ASCG 14 / 38 MC: 4
Location: 266487..266828

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal silencing factor RsfS n=1 Tax=Clostridium termitidis CT1112 RepID=S0FLX7_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 44.1
  • Coverage: 111.0
  • Bit_score: 119
  • Evalue 2.80e-24
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] t similarity UNIPROT
DB: UniProtKB
  • Identity: 44.1
  • Coverage: 111.0
  • Bit_score: 119
  • Evalue 3.90e-24
iojap family protein similarity KEGG
DB: KEGG
  • Identity: 48.5
  • Coverage: 101.0
  • Bit_score: 114
  • Evalue 1.50e-23

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Taxonomy

[Clostridium] termitidis → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 342
ATGGATGATATTTTAAATTTGTCAAAGGCAATCTATAAAGTTTTAGATGATAGAAAAGCTCAAGACTTAGTAGTCCTATCTGTTAAAGGTATAAGTCCAATTTCTGATTACTTTATAATTTGTACCGGAACCTCGACAACACACATGAATGCCCTTGCAGATCATGTTCGAAAAGAATTAAGCACAATTGGTGTTCAATTGAGACATAAAGAAGGTAAAGAGACCGGCGGCTGGTTGTTAATGGATTATAAAGACGTAATAGTTCATATTTTTAGTAGAGATATGAGAGACTATTATGGGCTTGAACGGATTTGGAGCGATGCGACCTTAATAAATTTCTAA
PROTEIN sequence
Length: 114
MDDILNLSKAIYKVLDDRKAQDLVVLSVKGISPISDYFIICTGTSTTHMNALADHVRKELSTIGVQLRHKEGKETGGWLLMDYKDVIVHIFSRDMRDYYGLERIWSDATLINF*