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SCNpilot_BF_INOC_scaffold_539

Search features with annotation key words

Displaying items 31-53 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_539_31
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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14625..15575
DNA (951bp) protein (317aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase
DNA-directed RNA polymerase subunit alpha n=2 Tax=Desulfotomaculum RepID=F6B5S1_DESCC
DNA-directed RNA polymerase subunit alpha
SCNpilot_BF_INOC_scaffold_539_32
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


15594..15935
DNA (342bp) protein (114aa)
50S ribosomal protein L17 n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=RL17_ALKOO
rplQ; 50S ribosomal protein L17
50S ribosomal protein L17 {ECO:0000255|HAMAP-Rule:MF_01368}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (str
SCNpilot_BF_INOC_scaffold_539_33
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16163..16993
DNA (831bp) protein (277aa)
cobalt transporter ATP-binding subunit (EC:3.6.3.-)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-
cobalt ABC transporter ATP-binding protein n=1 Tax=Clostridium sp. JC122 RepID=UPI000288086F
SCNpilot_BF_INOC_scaffold_539_34
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16978..17883
DNA (906bp) protein (302aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-
cobalt ABC transporter ATP-binding protein n=1 Tax=Clostridium arbusti RepID=UPI000287FA3F
cbiO; cobalt transporter ATP-binding subunit
SCNpilot_BF_INOC_scaffold_539_35
Clostridium sp. HMP27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17893..18687
DNA (795bp) protein (265aa)
Energy-coupling factor transporter transmembrane protein EcfT n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2EKW1_9FIRM
Energy-coupling factor transporter transmembrane protein EcfT {ECO:0000256|HAMAP-Rule:MF_01461}; Short=ECF transporter T component EcfT {ECO:0000256|HAMAP-Rule:MF_01461};; TaxID=1487921 species="Bacte
ABC transporter permease
SCNpilot_BF_INOC_scaffold_539_36
Eubacterium sp. CAG:274, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18695..19468
DNA (774bp) protein (258aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy
tRNA pseudouridine synthase A n=1 Tax=Eubacterium sp. CAG:274 RepID=R6PJ60_9FIRM
TRNA pseudouridine synthase A
SCNpilot_BF_INOC_scaffold_539_37
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


19614..20048
DNA (435bp) protein (145aa)
50S ribosomal protein L13 n=1 Tax=Clostridium ultunense Esp RepID=M1ZHY8_9CLOT
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc
rplM; 50S ribosomal protein L13
SCNpilot_BF_INOC_scaffold_539_38
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


20064..20459
DNA (396bp) protein (132aa)
30S ribosomal protein S9 n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PTS7_CLOSD
rpsI; 30S ribosomal subunit protein S9
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=499177 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridiu
SCNpilot_BF_INOC_scaffold_539_39
GWE2_Clostridiales_32_10_curated, Clostridiales, Bacteria

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20563..22008
DNA (1446bp) protein (482aa)
Putative uncharacterized protein id=2189440 bin=GWE2_Clostridiales_32_10 species=Clostridium ljungdahlii genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Clostridiales_32_10 organism_group=Clostridiales
hypothetical protein Tax=GWE2_Clostridiales_32_10_curated
AMMECR1 domain-containing protein
SCNpilot_BF_INOC_scaffold_539_40
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22169..23959
DNA (1791bp) protein (597aa)
Glycoside hydrolase family 18 n=1 Tax=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) RepID=B2A674_NATTJ
glycoside hydrolase family protein
Tax=BJP_IG2103_Clostridiales_50_15
SCNpilot_BF_INOC_scaffold_539_41
unknown

Not on your lists

23959..24267
DNA (309bp) protein (103aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_539_42
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24268..25926
DNA (1659bp) protein (553aa)
FAD-dependent dehydrogenase domain-containing protein n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B2T4_CLOA9
FAD-dependent dehydrogenase domain-containing protein
FAD-dependent dehydrogenase domain-containing protein {ECO:0000313|EMBL:AFS79447.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium aciduri
SCNpilot_BF_INOC_scaffold_539_43
GWB2_Clostridiales_37_7_curated, Clostridiales, Bacteria

Not on your lists

26224..27807
DNA (1584bp) protein (528aa)
Transporter id=1720870 bin=GWB2_Clostridiales_37_7 species=Caloramator australicus genus=Caloramator taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
transporter Tax=GWB2_Clostridiales_37_7_curated
Transporter
SCNpilot_BF_INOC_scaffold_539_44
unknown

Not on your lists

27820..27918
DNA (99bp) protein (33aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_539_45
GWB2_Clostridiales_37_7_curated, Clostridiales, Bacteria

Not on your lists

27966..28640
DNA (675bp) protein (225aa)
Alpha-glucosidase id=1720874 bin=GWB2_Clostridiales_37_7 species=Caloramator australicus genus=Caloramator taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
hypothetical protein Tax=GWB2_Clostridiales_37_7_curated
membrane protein of unknown function
SCNpilot_BF_INOC_scaffold_539_46
Youngiibacter fragilis, Youngiibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28733..29161)
DNA (429bp) protein (143aa)
aspartate carbamoyltransferase regulatory subunit (EC:2.1.3.2)
Aspartate carbamoyltransferase n=1 Tax=Youngiibacter fragilis 232.1 RepID=V7I3D5_9CLOT
Aspartate carbamoyltransferase {ECO:0000313|EMBL:ETA79796.1}; TaxID=994573 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Youngiibacter.;" source="Youngiibacter fragilis 232
SCNpilot_BF_INOC_scaffold_539_47
Youngiibacter fragilis, Youngiibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29148..30077)
DNA (930bp) protein (310aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=994573 species="Bac
pyrB; aspartate carbamoyltransferase catalytic subunit (EC:2.1.3.2)
Aspartate carbamoyltransferase n=2 Tax=Youngiibacter RepID=V7I0N6_9CLOT
SCNpilot_BF_INOC_scaffold_539_48
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30441..31811
DNA (1371bp) protein (457aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=1304284 species="
Dihydroorotase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CXE7_9CLOT
dihydroorotase, multifunctional complex type
SCNpilot_BF_INOC_scaffold_539_49
GWB2_Clostridiales_37_7_curated, Clostridiales, Bacteria

Not on your lists

31967..32902
DNA (936bp) protein (312aa)
orotidine 5'-phosphate decarboxylase (EC:4.1.1.23); K01591 orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] Tax=GWB2_Clostridiales_37_7_curated
orotidine 5''-phosphate decarboxylase id=1998923 bin=GWB2_Clostridiales_37_7 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
orotidine-5-phosphate decarboxylase
SCNpilot_BF_INOC_scaffold_539_50
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32913..33686
DNA (774bp) protein (258aa)
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit n=1 Tax=Clostridium pasteurianum BC1 RepID=R4K1W5_CLOPA
2-polyprenylphenol hydroxylase-like oxidoreductase
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; Dihydroorotate oxidase B, electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; TaxID=86416
SCNpilot_BF_INOC_scaffold_539_51
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33679..34599
DNA (921bp) protein (307aa)
Dihydroorotate dehydrogenase n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LZ22_CLOCD
dihydroorotate dehydrogenase family protein
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule
SCNpilot_BF_INOC_scaffold_539_52
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34722..35381)
DNA (660bp) protein (220aa)
Putative uncharacterized protein n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PXN7_CLOSD
conserved membrane protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:CBH21202.1}; TaxID=499177 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sticklandii
SCNpilot_BF_INOC_scaffold_539_53
unknown

Not on your lists

35750..35830
DNA (81bp) protein (27aa)

This feature has no annotations

Displaying items 31-53 of 53 in total

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