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SCNpilot_BF_INOC_scaffold_539_36

Organism: SCNpilot_BF_INOC_Clostridium_37_18

near complete RP 48 / 55 MC: 5 BSCG 50 / 51 MC: 4 ASCG 14 / 38 MC: 4
Location: 18695..19468

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy similarity UNIPROT
DB: UniProtKB
  • Identity: 47.7
  • Coverage: 243.0
  • Bit_score: 223
  • Evalue 3.30e-55
tRNA pseudouridine synthase A n=1 Tax=Eubacterium sp. CAG:274 RepID=R6PJ60_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 47.7
  • Coverage: 243.0
  • Bit_score: 223
  • Evalue 2.40e-55
TRNA pseudouridine synthase A similarity KEGG
DB: KEGG
  • Identity: 47.9
  • Coverage: 242.0
  • Bit_score: 222
  • Evalue 2.00e-55

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Taxonomy

Eubacterium sp. CAG:274 → Eubacterium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 774
ATGGAGACCGTTTTACTGACAGTCGCATATGATGGCAGTCGTTATTATGGATGGCAAAGACAAACTAAATTGCGTTCTGTCCAAGGAGAACTTGAAAAGGCCCTATCTCATGCGCTAAAACAACCGATCACAGTAGATGCGTCCGGCAGAACCGATGCAGGTGTTCATGGTTTGGCACAAACGGTAACCTTTAGATATATTAAAACATTACCTATAGAAAAAATGGTCGTTGTTATAAACCGAAGACTGCCTGAGGATATAATTATCTTAAGTGCTGAAAAAGTTAACGATGATTTTCATGCTAGATATTGTGCGATTGCTAAAGCATATGAGTACCATTTTGCCTTTGGATGCGATCGTAACCCATTTAATTCAAGCTATCGCTATAATCAGCCTCATCATTTAGACATAGATAAGATGATAGTCGCTATGAAGGATTTTGAAGGTACACACGATTTTACTGCATTTCAGGCTACTGGTAGTGAAAAAGAGAATACAATACGAACGATATATAAGGTTCATCTTGAGAAAAGAAATGATGAGTTCGTATTCACTGTTGTCGGCAATGGTTTCTTATATAATATGGTAAGAATTATGATGGGTACATTATTTAGTATTGGCAATGGTCAAATACCAGAAGCTTCCATTCCGCAGATTATAAAGAGTCAATTAAGAGCTAACGCAAAAGTTACTGCTCCGGCAAATGGTCTCTATTTAAAACAGGTTTTTTATGACAAAGCATCTTTAGAAAATTTCATAAAAAACTTGAATTAA
PROTEIN sequence
Length: 258
METVLLTVAYDGSRYYGWQRQTKLRSVQGELEKALSHALKQPITVDASGRTDAGVHGLAQTVTFRYIKTLPIEKMVVVINRRLPEDIIILSAEKVNDDFHARYCAIAKAYEYHFAFGCDRNPFNSSYRYNQPHHLDIDKMIVAMKDFEGTHDFTAFQATGSEKENTIRTIYKVHLEKRNDEFVFTVVGNGFLYNMVRIMMGTLFSIGNGQIPEASIPQIIKSQLRANAKVTAPANGLYLKQVFYDKASLENFIKNLN*