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SCNpilot_BF_INOC_scaffold_0_78

Organism: SCNpilot_BF_INOC_Clostridium_37_18

near complete RP 48 / 55 MC: 5 BSCG 50 / 51 MC: 4 ASCG 14 / 38 MC: 4
Location: 95594..96496

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridiu similarity UNIPROT
DB: UniProtKB
  • Identity: 44.0
  • Coverage: 293.0
  • Bit_score: 234
  • Evalue 1.70e-58
rluC1; ribosomal large subunit pseudouridine synthase C (EC:5.4.99.24) similarity KEGG
DB: KEGG
  • Identity: 43.1
  • Coverage: 295.0
  • Bit_score: 230
  • Evalue 4.90e-58
Pseudouridine synthase n=1 Tax=Clostridium sp. CAG:505 RepID=R7B7W6_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 44.0
  • Coverage: 293.0
  • Bit_score: 234
  • Evalue 1.20e-58

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Taxonomy

Clostridium sp. CAG:505 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 903
ATGAAGCAGATTATTATTACCGGTAATGAGTCAGAACAAAGATTAGATAGATTTTTACTCAAGTATTTTAATAATACGACCAGAAGCAATATTTATAAGCTCATTCGGAAAAAGGTTTTTAAAATCAATGGTAAGCGAATTACACAGGAGGACTATTTTTTGAAGGAAGCGGATGTTCTAGATATCTTTCTTTCTGATGAAAGTATGGCTGCCATGATGAAGGTATATGAACCCATAAAACCAAGCAAGCTTGGCCTTGATACCGTTTATGAGGACGATCAGATTTTAGTAGTCAATAAACCTAAGGGTATGCTAACGCATCCTGATCAAACTGAATACAAAAATACTTTGGCAACAATCGTTCAGTTTTATCTTAAGGATTTGAGCACACCTACATTTAAGCCAGCACCTGTTCATCGATTGGATAAAAATACAAGTGGGTTGGTTATTTTTGCAAAAACCTATGAAGCTTTAAAAAAATACAACGCCCTAATGCGTGAAAGAAACGTTGAGAAATACTATATTTGTGTCGTCCATGGCAGGCTAAAGCAATCGGGTGAAGTCAAGGGCTATCTAGTGAAGGACGAGTACTTAAATAAGGTTAGCATCCAGGACGAGGACCAGGATGATGCTAAATATTGTCACACAAAATACAAACCTCTTAAAGCCTTTGGAACCTATACGCTAGTTGAGGTTCAGCTTATGACTGGAAGAAGTCATCAGATTCGGGCTACGATGCAATATATTGGGCATCCAATTGTGGGTGATTTAAAATATGGTGGTAGACGTGTTGCAGGTAACAGCAATCAACTGCTTCACAGTAATCGTTTAATAGTAGAAGGACAGCGGTTTGAAGCGCCATCTATAGAAATAGAAGCTTTTATAAAGTCGCAATCCGAATAA
PROTEIN sequence
Length: 301
MKQIIITGNESEQRLDRFLLKYFNNTTRSNIYKLIRKKVFKINGKRITQEDYFLKEADVLDIFLSDESMAAMMKVYEPIKPSKLGLDTVYEDDQILVVNKPKGMLTHPDQTEYKNTLATIVQFYLKDLSTPTFKPAPVHRLDKNTSGLVIFAKTYEALKKYNALMRERNVEKYYICVVHGRLKQSGEVKGYLVKDEYLNKVSIQDEDQDDAKYCHTKYKPLKAFGTYTLVEVQLMTGRSHQIRATMQYIGHPIVGDLKYGGRRVAGNSNQLLHSNRLIVEGQRFEAPSIEIEAFIKSQSE*