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SCNpilot_BF_INOC_scaffold_0_477

Organism: SCNpilot_BF_INOC_Clostridium_37_18

near complete RP 48 / 55 MC: 5 BSCG 50 / 51 MC: 4 ASCG 14 / 38 MC: 4
Location: comp(516850..517272)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase specialized sigma subunit, sigma24-like protein n=2 Tax=Dehalobacter RepID=K4KPD2_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 52.6
  • Coverage: 137.0
  • Bit_score: 152
  • Evalue 3.70e-34
DNA-directed RNA polymerase specialized sigma subunit, sigma24-like protein similarity KEGG
DB: KEGG
  • Identity: 52.6
  • Coverage: 137.0
  • Bit_score: 152
  • Evalue 1.00e-34
DNA-directed RNA polymerase specialized sigma subunit, sigma24-like protein {ECO:0000313|EMBL:AFV04021.1}; TaxID=1131462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehal similarity UNIPROT
DB: UniProtKB
  • Identity: 52.6
  • Coverage: 137.0
  • Bit_score: 152
  • Evalue 5.10e-34

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Taxonomy

Dehalobacter sp. CF → Dehalobacter → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 423
ATGAAAAAAATAAACTTAAAGGACTTTTATACATTTTATGATAAAGACACTTATGTTAATGTCAATGAAACTATTGCTGATGAAATGGAAGCATTTAAACGCAAAGAATCATCCTATCTAAGAAAGCTTTACCGATATAAGGCGCATTACTCTCTGGATCGAAACGATGGCATCGATCAAGACATCACCTATTCATCACAATCGCCCTATGAACTTTACGAAAGAAAGATCACAACAAAAGCACTCTACAGCGCCCTAAATCAGTTACCCGACATCCAGGCAAAGCGCATCTATGCCTATTACTTCTTAGACATGAGCAAGACCGACATCGCAAATGCTGAAGACGTCAGTGTAAAAGCCGTCTGCAATTCTATTGATCGAGGACTTGAAACACTGGGCAAAGTGCTGAAGCTTAATTTATAG
PROTEIN sequence
Length: 141
MKKINLKDFYTFYDKDTYVNVNETIADEMEAFKRKESSYLRKLYRYKAHYSLDRNDGIDQDITYSSQSPYELYERKITTKALYSALNQLPDIQAKRIYAYYFLDMSKTDIANAEDVSVKAVCNSIDRGLETLGKVLKLNL*