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SCNpilot_BF_INOC_scaffold_25_46

Organism: SCNpilot_BF_INOC_Xanthomonadales_64_24

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 47024..47608

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide transport periplasmic protein LptA n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VKN5_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 41.6
  • Coverage: 190.0
  • Bit_score: 132
  • Evalue 5.40e-28
Lipopolysaccharide export system protein LptA {ECO:0000256|HAMAP-Rule:MF_01914}; Flags: Precursor;; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadac similarity UNIPROT
DB: UniProtKB
  • Identity: 41.6
  • Coverage: 190.0
  • Bit_score: 132
  • Evalue 7.60e-28
lipopolysaccharide transport periplasmic protein LptA similarity KEGG
DB: KEGG
  • Identity: 41.2
  • Coverage: 194.0
  • Bit_score: 129
  • Evalue 9.90e-28

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Taxonomy

Rhodanobacter fulvus → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 585
ATGTCCACAATACCTTTGAACCGAACCGGCGCAAGCCCTGATCGCTTGCTCGGTTGGCAACTGCTGCTCGCCGCGATCGGCATGCTGGCGTTTGCTGCAGCCCACGCCCTGAGCAGCGACCGCGACAAGAACCTCGAGGTCCGCGCCAGCTACAACAAGATGGTCACCACCACGCCGTCATATGCGTTGTTCAAGGACAACGTGCGCATCGAGCAAGGCTCGCTGAAAGCCAGCGGCGATGAAGCGCGCGTCTATGAAGGAGACGGCAGCAATGATTCCGGCCGTCGCATCGTGTTGAGCGGATCGCCTGCACGCCTTGAACAGTTGCAGGACAACAACGGCGGCCTGATGACCGCGCGGGCCGCCGAAATCGACTACAACGATGGCAGCCACATTGCCATCCTCACTGGCGATGTCGTCGTCGTGCAGGAAGGCAAATCCGAATTCCGTGGCCAGCGCATGACCTACAACACCGAAACAGGTGCCATGGAGGGCGGCAGCCAGGCCCCGGGCAGTGAAGTGCACATGACCTTCAAACCCAAGCCCAAGGCTGCCAGCAAGCCGGCCACGGACAGCAATCGCTGA
PROTEIN sequence
Length: 195
MSTIPLNRTGASPDRLLGWQLLLAAIGMLAFAAAHALSSDRDKNLEVRASYNKMVTTTPSYALFKDNVRIEQGSLKASGDEARVYEGDGSNDSGRRIVLSGSPARLEQLQDNNGGLMTARAAEIDYNDGSHIAILTGDVVVVQEGKSEFRGQRMTYNTETGAMEGGSQAPGSEVHMTFKPKPKAASKPATDSNR*