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SCNpilot_BF_INOC_scaffold_25_47

Organism: SCNpilot_BF_INOC_Xanthomonadales_64_24

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 47608..48327

Top 3 Functional Annotations

Value Algorithm Source
lipopolysaccharide ABC transporter ATP-binding protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037DE316 similarity UNIREF
DB: UNIREF100
  • Identity: 76.6
  • Coverage: 239.0
  • Bit_score: 366
  • Evalue 1.60e-98
Lipopolysaccharide ABC transporter ATP-binding protein {ECO:0000313|EMBL:GAN45860.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakii similarity UNIPROT
DB: UniProtKB
  • Identity: 74.1
  • Coverage: 239.0
  • Bit_score: 364
  • Evalue 1.50e-97
ABC-type (unclassified) transport system, ATPase component similarity KEGG
DB: KEGG
  • Identity: 74.1
  • Coverage: 239.0
  • Bit_score: 360
  • Evalue 4.30e-97

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Taxonomy

Mizugakiibacter sediminis → Mizugakiibacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 720
ATGCTGCATGCGGCAAACCTGCGCAAGGCCTATGGCGGCCGCAGCGTCGTGCGCGATTTCGGTTTTTCGCTGCGCCAGGGCGAGGTCGTCGGCCTGCTCGGCCCGAACGGTGCCGGCAAGACCACCTGTTTCTACATGGTGGTCGGCCTGGTCGCCGCCGATTCCGGCAGCATCCGCCTTGATGACCGCACCATCACCACCATGCCGATGCACGAGCGTGCCGCATTGGGCGTTGGCTACCTGCCGCAGGAACCCTCGATCTTCCGTCGCCTCAGCGTTGCCGACAATGTCATGGCCATCCTCGAGTTGCGCAAGGACCTCGATGCCAAGGGCCGTGAAGGCGAGCTGGAGCACCTGCTTGATGACCTGCAGATCAGCCATATCGCGCGCAGCAAGGGGGCGAGCCTGTCCGGCGGCGAGCGCCGTCGCGTCGAGATCACCCGCGCGCTGGCCGCCAGGCCGCGCTTCCTGCTGCTCGACGAACCCTTTGCCGGCATCGACCCGATTTCGGTTGTCGACATCCAGCGCATCGTGCGGCACCTGAAGGCACGCAACATCGGCATCCTCATCACCGACCACAACGTGCGCGAAACGCTCGGCATCTGTGATCGGGCCTACATCATGAATGAAGGTGCCGTCCTCACCCAGGGCACCCCGGCCGAAGTCCTGGCCAACGAGAAGGTGCGCGAGGTCTATCTCGGCACCGAGTTCCGCATGTAG
PROTEIN sequence
Length: 240
MLHAANLRKAYGGRSVVRDFGFSLRQGEVVGLLGPNGAGKTTCFYMVVGLVAADSGSIRLDDRTITTMPMHERAALGVGYLPQEPSIFRRLSVADNVMAILELRKDLDAKGREGELEHLLDDLQISHIARSKGASLSGGERRRVEITRALAARPRFLLLDEPFAGIDPISVVDIQRIVRHLKARNIGILITDHNVRETLGICDRAYIMNEGAVLTQGTPAEVLANEKVREVYLGTEFRM*