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SCNpilot_BF_INOC_scaffold_512

Search features with annotation key words

Displaying items 1-30 of 157 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_512_1
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..1208)
DNA (1206bp) protein (402aa)
Putative membrane transport protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AH41_9ACTN
Putative membrane transport protein {ECO:0000313|EMBL:EAR25047.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
permease of the major facilitator superfamily
SCNpilot_BF_INOC_scaffold_512_2
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1250..1753
DNA (504bp) protein (168aa)
phosphoribosyltransferase n=1 Tax=Microbacteriaceae RepID=UPI00035E879B
Contig_14, whole genome shotgun sequence {ECO:0000313|EMBL:KIU03820.1}; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium
xanthine-guanine phosphoribosyltransferase
SCNpilot_BF_INOC_scaffold_512_3
Cryobacterium roopkundense, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1750..2475
DNA (726bp) protein (242aa)
hypothetical protein id=7719395 bin=CNBR_ACT species=Clavibacter michiganensis genus=Clavibacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Peptidase S51 {ECO:0000313|EMBL:KGJ71700.1}; TaxID=1001240 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium roopkundense.;"
serine peptidase, family S51
SCNpilot_BF_INOC_scaffold_512_4
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2472..3176
DNA (705bp) protein (235aa)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBas
uracil-DNA glycosylase n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B3C23A
ung; uracil-DNA glycosylase
SCNpilot_BF_INOC_scaffold_512_5
Cryobacterium roopkundense, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3344..4243
DNA (900bp) protein (300aa)
ABC transporter ATP-binding protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B4BF34
Uncharacterized protein {ECO:0000313|EMBL:KGJ77466.1}; TaxID=1001240 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium roopkundense.;"
multidrug ABC transporter ATPase
SCNpilot_BF_INOC_scaffold_512_6
unknown

Not on your lists

comp(4593..4862)
DNA (270bp) protein (90aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_512_7
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5024..5602
DNA (579bp) protein (193aa)
Phosphinothricin acetyltransferase protein n=1 Tax=Leifsonia xyli subsp. cynodontis DSM 46306 RepID=U3PEV0_LEIXC
Phosphinothricin acetyltransferase {ECO:0000313|EMBL:KJC65547.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
phosphinothricin acetyltransferase protein
SCNpilot_BF_INOC_scaffold_512_8
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5648..6412)
DNA (765bp) protein (255aa)
Putative ABC transporter permease n=1 Tax=Leifsonia rubra CMS 76R RepID=S7XIS0_9MICO
Putative ABC transporter permease {ECO:0000313|EMBL:EPR75918.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
ABC transporter inner membrane subunit
SCNpilot_BF_INOC_scaffold_512_9
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6409..7317)
DNA (909bp) protein (303aa)
multidrug ABC transporter ATPase; K01990 ABC-2 type transport system ATP-binding protein id=7719385 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERK71768.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 1466
multidrug ABC transporter ATPase
SCNpilot_BF_INOC_scaffold_512_10
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7314..7667)
DNA (354bp) protein (118aa)
GntR family transcriptional regulator n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B3F2DF
GntR family transcriptional regulator {ECO:0000313|EMBL:KJC63823.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
GntR family transcriptional regulator
SCNpilot_BF_INOC_scaffold_512_11
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7730..9190
DNA (1461bp) protein (487aa)
amidase n=1 Tax=Agromyces italicus RepID=UPI0003B4674D
amidase
Putative amidase {ECO:0000313|EMBL:CAQ01558.1}; TaxID=31964 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. sepedonicus (st
SCNpilot_BF_INOC_scaffold_512_12
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9241..9597
DNA (357bp) protein (119aa)
siderophore-interacting protein n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI000288CD70
Siderophore-interacting protein {ECO:0000313|EMBL:EPR75914.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
SCNpilot_BF_INOC_scaffold_512_13
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9612..10265)
DNA (654bp) protein (218aa)
Transcriptional regulator, TetR family n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RQ00_LEIAQ
HTH-type transcriptional regulator AcrR {ECO:0000313|EMBL:KJL21817.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadir
TetR family transcriptional regulator
SCNpilot_BF_INOC_scaffold_512_14
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10425..12083
DNA (1659bp) protein (553aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003745702
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KDA04689.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp.
extracellular solute-binding protein family 5 protein
SCNpilot_BF_INOC_scaffold_512_15
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12161..12985
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI000300C221
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGM12726.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;
ABC transporter
SCNpilot_BF_INOC_scaffold_512_16
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

12982..13791
DNA (810bp) protein (270aa)
peptide ABC transporter ATPase n=1 Tax=Microbacterium barkeri RepID=UPI0002FF59F0
ABC transporter
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
SCNpilot_BF_INOC_scaffold_512_17
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13788..14867
DNA (1080bp) protein (360aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000369211C
Peptide ABC transporter permease {ECO:0000313|EMBL:KGM03468.1}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 201
binding-protein-dependent transport systems inner membrane component
SCNpilot_BF_INOC_scaffold_512_18
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14871..15941
DNA (1071bp) protein (357aa)
hypothetical protein n=1 Tax=Microbacterium sp. 11MF RepID=UPI00036C0492
Peptide ABC transporter permease {ECO:0000313|EMBL:KDA04685.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
binding-protein-dependent transport systems inner membrane component
SCNpilot_BF_INOC_scaffold_512_19
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

15938..18190
DNA (2253bp) protein (751aa)
Beta-D-glucosideglucohydrolase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KCM9_9MICO
glycoside hydrolase family 3 domain-containing protein
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
SCNpilot_BF_INOC_scaffold_512_20
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18218..18658)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AH49_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EAR25055.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_512_21
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18655..20085)
DNA (1431bp) protein (477aa)
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8ND26_MICTS
pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component {ECO:0000313|EMBL:BAJ73665.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteria
SCNpilot_BF_INOC_scaffold_512_22
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20482..21270)
DNA (789bp) protein (263aa)
arginase; K01476 arginase [EC:3.5.3.1] id=7719376 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Arginase {ECO:0000313|EMBL:EAR25059.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
arginase/agmatinase/formimionoglutamate hydrolase, arginase family
SCNpilot_BF_INOC_scaffold_512_23
Leifsonia sp. SCN1, Leifsonia, Actinomycetales, CNBR_ACT, Actinobacteria, Bacteria

Not on your lists

comp(21326..22030)
DNA (705bp) protein (235aa)
Putative uncharacterized protein id=7719372 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Putative uncharacterized protein id=7719372 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
SCNpilot_BF_INOC_scaffold_512_24
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22014..22643)
DNA (630bp) protein (210aa)
ECF subfamily RNA polymerase sigma-24 subunit id=7719371 bin=CNBR_ACT species=Salinibacterium sp. PAMC 21357 genus=Salinibacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Putative RNA polymerase sigma factor {ECO:0000313|EMBL:EPR75909.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
ECF subfamily RNA polymerase sigma-24 subunit
SCNpilot_BF_INOC_scaffold_512_25
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22725..23840)
DNA (1116bp) protein (372aa)
glxK; glycerate kinase (EC:2.7.1.31)
Glycerate kinase {ECO:0000313|EMBL:CCH85535.1}; EC=2.7.1.31 {ECO:0000313|EMBL:CCH85535.1};; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" s
Glycerate kinase n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4EQ72_MODMB
SCNpilot_BF_INOC_scaffold_512_26
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24004..24804
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM 20744 / JCM 9667 / LMG 2889 / C-1) RepID=B0RAP5_CLAMS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAQ01583.1}; TaxID=31964 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. sepedoni
SCNpilot_BF_INOC_scaffold_512_27
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24818..25387)
DNA (570bp) protein (190aa)
Arginyl-tRNA synthetase {ECO:0000313|EMBL:EAR25071.1}; EC=6.1.1.19 {ECO:0000313|EMBL:EAR25071.1};; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
arginyl-tRNA synthetase n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI0002891A1C
ABC transporter ATP-binding protein
SCNpilot_BF_INOC_scaffold_512_28
unknown

Not on your lists

comp(25441..25584)
DNA (144bp) protein (48aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_512_29
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


26060..27043
DNA (984bp) protein (328aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1589899 species="Bacteria; Act
Arginine--tRNA ligase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NAX8_MICTS
argS; arginyl-tRNA synthetase
SCNpilot_BF_INOC_scaffold_512_30
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27045..27845
DNA (801bp) protein (267aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000363D442
Uncharacterized protein {ECO:0000313|EMBL:CDJ99048.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein
Displaying items 1-30 of 157 in total

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