ggKbase home page

SCNpilot_BF_INOC_scaffold_1812

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1812_1
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..1718)
DNA (1716bp) protein (572aa)
Uncharacterized protein n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GH89_EUBLK
Uncharacterized protein {ECO:0000313|EMBL:ADO39044.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612
hypothetical protein
SCNpilot_BF_INOC_scaffold_1812_2
Bacillus akibai, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2009..4129)
DNA (2121bp) protein (707aa)
Xylosidase B n=2 Tax=Paenibacillus polymyxa RepID=E3E7E5_PAEPS
Beta-xylosidase {ECO:0000313|EMBL:GAE33710.1}; TaxID=1236973 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus akibai (strain ATCC 43226 / DSM 21942 / JCM 9
xylosidase b
SCNpilot_BF_INOC_scaffold_1812_3
Paenibacillus sp. FSL R7-0273, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4166..4762)
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Paenibacillus fonticola RepID=UPI00036D9168
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIQ45697.1}; TaxID=1536772 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R7-0273.;"
SCNpilot_BF_INOC_scaffold_1812_4
Desulfitobacterium dehalogenans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5162..5776
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Desulfitobacterium sp. PCE1 RepID=UPI0003650163
transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:AFM00947.1}; TaxID=756499 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacteriu
SCNpilot_BF_INOC_scaffold_1812_5
RBG_13_Aminicenantes_63_10_curated, Aminicenantes, Bacteria

Not on your lists

comp(5819..7543)
DNA (1725bp) protein (575aa)
hypothetical protein Tax=RBG_13_Aminicenantes_63_10_curated
Putative uncharacterized protein id=1706166 bin=GWB2_Ignavibacteria_35_12 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
hypothetical protein
SCNpilot_BF_INOC_scaffold_1812_6
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8606..9640
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Bacteroides dorei 5_1_36/D4 RepID=C3R9G8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEO45677.1}; TaxID=556260 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei 5_1_36/D4.;"
glycosidase
SCNpilot_BF_INOC_scaffold_1812_7
unknown

Not on your lists

comp(9607..10350)
DNA (744bp) protein (248aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1812_8
unknown

Not on your lists

comp(10488..11270)
DNA (783bp) protein (261aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1812_9
BJP_IG2158_Thermincola_46_17, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11471..12589
DNA (1119bp) protein (373aa)
Glycosyl transferase family 2 n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9RAQ6_CLOSW
family 2 glycosyl transferase
Tax=BJP_IG2158_Thermincola_46_17
SCNpilot_BF_INOC_scaffold_1812_10
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12615..13913)
DNA (1299bp) protein (433aa)
Collagen triple helix repeat n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KRJ2_CLOPH
triple helix repeat-containing collagen
Collagen triple helix repeat {ECO:0000313|EMBL:ABX42066.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 7
SCNpilot_BF_INOC_scaffold_1812_11
unknown

Not on your lists

comp(14125..14550)
DNA (426bp) protein (142aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1812_12
unknown

Not on your lists

comp(14984..15094)
DNA (111bp) protein (37aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1812_13
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15247..15492
DNA (246bp) protein (82aa)
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CDC65737.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" sour
SCNpilot_BF_INOC_scaffold_1812_14
unknown

Not on your lists

15560..15829
DNA (270bp) protein (90aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1812_15
unknown

Not on your lists

15852..16706
DNA (855bp) protein (285aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1812_16
unknown

Not on your lists

comp(17201..17581)
DNA (381bp) protein (127aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1812_17
RBG_13_Planctomycetes_60_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(17743..18396)
DNA (654bp) protein (218aa)
putative ribonucleoside hydrolase (EC:3.2.-.-) Tax=RBG_13_Planctomycetes_60_9_curated
Inosine/uridine-preferring nucleoside hydrolase n=1 Tax=Asticcacaulis excentricus (strain ATCC 15261 / DSM 4724 / VKM B-1370 / CB 48) RepID=E8RPJ7_ASTEC
inosine/uridine-preferring nucleoside hydrolase
Displaying 17 items

View Taxonomy