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SCNpilot_BF_INOC_scaffold_2252

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_2252_1
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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321..6929
DNA (6609bp) protein (2203aa)
Putative cell wall associated protein/ RHS repeat family n=2 Tax=Clostridium botulinum RepID=F4A9I8_CLOBO
putative cell wall associated protein rbh
Putative cell wall associated protein/ RHS repeat family {ECO:0000313|EMBL:AEB75043.1}; TaxID=929506 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Cl
SCNpilot_BF_INOC_scaffold_2252_2
unknown

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7173..7289
DNA (117bp) protein (39aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2252_3
Pelosinus fermentans, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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7806..8327
DNA (522bp) protein (174aa)
Transposase IS200-family protein n=5 Tax=Pelosinus fermentans RepID=I8REE3_9FIRM
Transposase IS200-family protein {ECO:0000313|EMBL:EIW17758.1}; TaxID=1149862 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus fermentans
transposase IS200-family protein
SCNpilot_BF_INOC_scaffold_2252_4
unknown

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8351..8914
DNA (564bp) protein (188aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2252_5
unknown

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9419..10228
DNA (810bp) protein (270aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2252_6
unknown

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10602..11729
DNA (1128bp) protein (376aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2252_7
unknown

Not on your lists

12474..13502
DNA (1029bp) protein (343aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2252_8
Virgibacillus sp. Vm-5, Virgibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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13531..13974
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Virgibacillus sp. CM-4 RepID=T0JH38_9BACI
Peptidoglycan DL-endopeptidase CwlO {ECO:0000313|EMBL:CDQ39016.1}; Flags: Precursor;; TaxID=1462526 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Virgibacillus.;" source="Virgibacil
Secreted peptidase
SCNpilot_BF_INOC_scaffold_2252_9
unknown

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14018..15046
DNA (1029bp) protein (343aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2252_10
Geobacillus thermoleovorans, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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15208..16749
DNA (1542bp) protein (514aa)
Putative uncharacterized protein n=1 Tax=Geobacillus thermoleovorans CCB_US3_UF5 RepID=G8N7K9_GEOTH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV20707.1}; TaxID=1111068 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus; Geobacillus thermoleovorans group.;" source="Geobacil
SCNpilot_BF_INOC_scaffold_2252_11
unknown

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16742..17221
DNA (480bp) protein (160aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2252_12
Clostridium sp. CAG:964, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17482..19029)
DNA (1548bp) protein (516aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:964 RepID=R6V8K7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC79077.1}; TaxID=1262848 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
SCNpilot_BF_INOC_scaffold_2252_13

Not on your lists

comp(19026..20585)
DNA (1560bp) protein (520aa)
Putative uncharacterized protein n=1 Tax=uncultured organism RepID=D9ZF55_9ZZZZ
Putative uncharacterized protein {ECO:0000313|EMBL:ADD61959.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
conserved hypothetical protein
SCNpilot_BF_INOC_scaffold_2252_14
Clostridium sp. CAG:964, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20597..21328)
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:964 RepID=R6UG30_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC79081.1}; TaxID=1262848 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
ABC-2 type transporter.
SCNpilot_BF_INOC_scaffold_2252_15
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21328..22386)
DNA (1059bp) protein (353aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2DDG7_CLOS4
ABC transporter
ABC transporter {ECO:0000313|EMBL:CDZ23384.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
SCNpilot_BF_INOC_scaffold_2252_16
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22629..23855
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VR79_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO62201.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753
hypothetical protein
SCNpilot_BF_INOC_scaffold_2252_17
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23856..24770)
DNA (915bp) protein (305aa)
Zinc carboxypeptidase n=1 Tax=Clostridium leptum DSM 753 RepID=A7VT68_9CLOT
peptidase M14 carboxypeptidase A
Peptidase M14 carboxypeptidase A {ECO:0000313|EMBL:CDZ24015.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellul
SCNpilot_BF_INOC_scaffold_2252_18
Ruminococcus sp. CAG:488, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24794..25333
DNA (540bp) protein (180aa)
NUDIX hydrolase n=1 Tax=Ruminococcus sp. CAG:488 RepID=R5Y037_9FIRM
NUDIX hydrolase {ECO:0000313|EMBL:CDA20240.1}; TaxID=1262959 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp.
NUDIX hydrolase
SCNpilot_BF_INOC_scaffold_2252_19
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25403..25879
DNA (477bp) protein (159aa)
thioesterase n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2D18E
thioesterase superfamily protein
Thioesterase superfamily protein {ECO:0000313|EMBL:ABN53886.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermoc
SCNpilot_BF_INOC_scaffold_2252_20
[Clostridium] cellulolyticum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25952..26257)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) RepID=B8I8M1_CLOCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL75254.1}; TaxID=394503 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium cellulolyticum (
SCNpilot_BF_INOC_scaffold_2252_21
Anaerotruncus sp. CAG:528, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26276..27403)
DNA (1128bp) protein (376aa)
Prephenate dehydratase (EC:4.2.1.51)
Prephenate dehydratase n=1 Tax=Anaerotruncus sp. CAG:528 RepID=R5XDC3_9FIRM
Prephenate dehydratase {ECO:0000313|EMBL:CDA13533.1}; TaxID=1262700 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotru
SCNpilot_BF_INOC_scaffold_2252_22
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27426..28496)
DNA (1071bp) protein (357aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU0
chorismate synthase (EC:4.2.3.5)
chorismate synthase n=1 Tax=Clostridium sporosphaeroides RepID=UPI00037B38F9
Displaying 22 items

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