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SCNpilot_BF_INOC_scaffold_949

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_949_1
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..1772
DNA (1770bp) protein (590aa)
mfd; Transcription-repair-coupling factor (EC:3.6.4.-)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=29343 species="Bacteria; Fir
transcription-repair coupling factor n=1 Tax=Clostridium sporosphaeroides RepID=UPI0003812FF8
SCNpilot_BF_INOC_scaffold_949_2
unknown

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comp(1895..2371)
DNA (477bp) protein (159aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_949_3
unknown

Not on your lists

comp(2572..3471)
DNA (900bp) protein (300aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_949_4
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3483..4328)
DNA (846bp) protein (282aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rR
dimethyladenosine transferase (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HXY5_9FIRM
SCNpilot_BF_INOC_scaffold_949_5
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4497..4994
DNA (498bp) protein (166aa)
Deoxycytidylate deaminase n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E1B1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDZ23457.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
SCNpilot_BF_INOC_scaffold_949_6
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5043..7256
DNA (2214bp) protein (738aa)
Formate acetyltransferase 1 n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LWF9_CLOCD
Formate acetyltransferase 1 {ECO:0000313|EMBL:AEV67585.1}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum
formate acetyltransferase 1
SCNpilot_BF_INOC_scaffold_949_7
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7272..7997
DNA (726bp) protein (242aa)
Pyruvate formate-lyase-activating enzyme {ECO:0000256|RuleBase:RU362053}; EC=1.97.1.4 {ECO:0000256|RuleBase:RU362053};; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococ
Pyruvate formate-lyase 1-activating enzyme n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EA69_9CLOT
pyruvate formate-lyase 1-activating enzyme
SCNpilot_BF_INOC_scaffold_949_8
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8078..8809
DNA (732bp) protein (244aa)
Probable transcriptional regulatory protein CLOLEP_02910 n=1 Tax=Clostridium leptum DSM 753 RepID=A7VWE5_9CLOT
Probable transcriptional regulatory protein BN578_02375 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environm
conserved hypothetical protein TIGR01033
SCNpilot_BF_INOC_scaffold_949_9
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9085..10755
DNA (1671bp) protein (557aa)
AMP-dependent synthetase and ligase n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1TAU1_9CLOT
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:EGD48634.1}; TaxID=588581 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] pa
AMP-dependent synthetase and ligase
SCNpilot_BF_INOC_scaffold_949_10
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10815..12506
DNA (1692bp) protein (564aa)
PASTA domain protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I7E4_9FIRM
PASTA domain protein {ECO:0000313|EMBL:CDB41341.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus
PASTA domain./Protein kinase domain.
SCNpilot_BF_INOC_scaffold_949_11
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12752..13780
DNA (1029bp) protein (343aa)
Heat-inducible transcription repressor hrcA n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P7S7_9FIRM
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; An
heat shock gene repressor HrcA
SCNpilot_BF_INOC_scaffold_949_12
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13827..14336
DNA (510bp) protein (170aa)
Protein GrpE n=1 Tax=Clostridium sp. MSTE9 RepID=J0WSM2_9CLOT
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales
grpE; protein GrpE
SCNpilot_BF_INOC_scaffold_949_13
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14376..16217
DNA (1842bp) protein (614aa)
Chaperone protein DnaK n=2 Tax=root RepID=R5MXV6_9FIRM
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP
chaperone protein DnaK
SCNpilot_BF_INOC_scaffold_949_14
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

16367..17521
DNA (1155bp) protein (385aa)
Chaperone protein DnaJ n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6Y6Z4_9FIRM
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
chaperone protein DnaJ
SCNpilot_BF_INOC_scaffold_949_15
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17666..17848
DNA (183bp) protein (61aa)
Ribbon-helix-helix protein, CopG family n=1 Tax=Clostridium sp. MSTE9 RepID=J1H2C2_9CLOT
Ribbon-helix-helix protein, CopG family {ECO:0000313|EMBL:EJF39388.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MS
SCNpilot_BF_INOC_scaffold_949_16
Paenibacillus barengoltzii, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17993..18301
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Paenibacillus sanguinis RepID=UPI00036B6924
Uncharacterized protein {ECO:0000313|EMBL:EOS57130.1}; TaxID=1235795 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus barengoltzii G22.;"
SCNpilot_BF_INOC_scaffold_949_17
unknown

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comp(18176..18448)
DNA (273bp) protein (91aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_949_18
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18540..19862)
DNA (1323bp) protein (441aa)
Citrate synthase n=1 Tax=Clostridium leptum DSM 753 RepID=A7VNV0_9CLOT
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
hypothetical protein
Displaying 18 items

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