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SCNpilot_BF_INOC_scaffold_1648_11

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: comp(10918..12117)

Top 3 Functional Annotations

Value Algorithm Source
Major facilitator superfamily MFS_1 n=1 Tax=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) RepID=A3DEQ5_CLOTH similarity UNIREF
DB: UNIREF100
  • Identity: 30.0
  • Coverage: 397.0
  • Bit_score: 206
  • Evalue 6.10e-50
major facilitator transporter similarity KEGG
DB: KEGG
  • Identity: 30.0
  • Coverage: 397.0
  • Bit_score: 206
  • Evalue 1.70e-50
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABN52434.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium ther similarity UNIPROT
DB: UniProtKB
  • Identity: 30.0
  • Coverage: 397.0
  • Bit_score: 206
  • Evalue 8.50e-50

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Taxonomy

Ruminiclostridium thermocellum → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1200
ATGAATTTTATCAGAAAATTGAGAGAATATCCACTGCCGGCCGTACTTTCCGCCAACTTTCTTGTATACTGCTCGCTGGCGTTTTACTATGTTTTTGTTCCGATTTACATCAGAAAATTCCATTCCTTTTCCCAAGTGGGATTCCTTCTCTCCATCGGTCCGTTCATTGCGATATTCGCCCCGCTTTTTTGGGGGAAAATAGCGGATAAAGCAAAATCCAAGAATACTGTTCTGATCGTTCTGCTCACAGGCTGCGGCGTTGCCTTTTTTGGTGTTTCCTTCAATACACTGTTCCATTTCCCCTCAGGGTTTCCCGTTGACTTTTCGTTTTTCTGGCTTGTTTTGATGTTGAGTGCAATCATGTTTTTCTCCTCCCCGTTTTCCAGCTTGCTTGATGTAATCACGCTGGACTATGCCGTGAAAACCGAGTCGAAATACGGAACCCTACGGTTGCTGGGTACCATCGGATATGGGATATTATGCTTTGTTATCGGTATGGTAGCCGACAAAAGCGAGTATGGAAATTTTTATTTGTATCTTGTGGTTACCCTTTTGGCTGTCATTTCTGTTTCTCTGATGCCTGCCAGCAAGGGATATGCCAGAGGTATGAAAAAGGTCTCTCTGAAGCCTCTGTTTCATGACAAGACGCTTCTTCTGCTTCTGCTGTTCCTGATCGCCGGTCAGTTTATCTTTGGATTTTATCAGAACTTCTACACCATTTATATGAGCGAGGAGCTGAAATTCCCCGGCTGGTCCTGGGGGCTGGTTGCATCCCTGCAGCCACTGGGCGAGGTTCCTTTCTTCTTACTGTTTCATAAGGTCTATAAAAAATTCAGCCTGCAAACCGTTATGCTGGCGGGGCTTGCGGCCGGTATTGTCCGTTACGCCGCCCTGGGCATGGCCGTCTCTATCCCGCTGGTCATTCTCATCAATATTGTAACCGGTCTTCTGCAGACGATTTTACTATACTCCGTCGTTCTGTATTTAAACGATACCATCGCCCCGGAGATGAAAGCCACAGGGCAAACCTTTATTTATTCTTTTGGTGTGTTCACCCCCAAAATTCTATCCGGCTTTTTGGGCGGCGTGCTGTCCCAATCCATGGGCATCAAAAACACTCTGTTCTTTTGTTCCGGCATTTCCGTGTTGTTCACGATCCTGATTCTTATTTTTCCTATAAAATACAAACTGAAAAAATAA
PROTEIN sequence
Length: 400
MNFIRKLREYPLPAVLSANFLVYCSLAFYYVFVPIYIRKFHSFSQVGFLLSIGPFIAIFAPLFWGKIADKAKSKNTVLIVLLTGCGVAFFGVSFNTLFHFPSGFPVDFSFFWLVLMLSAIMFFSSPFSSLLDVITLDYAVKTESKYGTLRLLGTIGYGILCFVIGMVADKSEYGNFYLYLVVTLLAVISVSLMPASKGYARGMKKVSLKPLFHDKTLLLLLLFLIAGQFIFGFYQNFYTIYMSEELKFPGWSWGLVASLQPLGEVPFFLLFHKVYKKFSLQTVMLAGLAAGIVRYAALGMAVSIPLVILINIVTGLLQTILLYSVVLYLNDTIAPEMKATGQTFIYSFGVFTPKILSGFLGGVLSQSMGIKNTLFFCSGISVLFTILILIFPIKYKLKK*