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SCNpilot_BF_INOC_scaffold_1648_12

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: 12305..13075

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LTH7_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 77.0
  • Coverage: 256.0
  • Bit_score: 398
  • Evalue 4.10e-108
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis similarity UNIPROT
DB: UniProtKB
  • Identity: 77.3
  • Coverage: 256.0
  • Bit_score: 398
  • Evalue 9.80e-108
sigma-B/F/G subfamily RNA polymerase sigma-28 factor similarity KEGG
DB: KEGG
  • Identity: 77.1
  • Coverage: 253.0
  • Bit_score: 395
  • Evalue 1.30e-107

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Taxonomy

Anaerotruncus colihominis → Anaerotruncus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 771
TTGTACAACAACAAGGTTGAAATATGCGGAGTAAACACGTCTAAACTGGTTGTTCTGAAGGAGTCAAAAAAAATAGAGCTGCTCAAGAAAATGAAAGAGGGGGATATGAAAGCAAGGGACGAGCTGATATCCGGAAATCTGAAGCTTGTGCTGAGCGTGATTAAAAAATTTACCGGCAGAGGAGAAAATCTGGATGACCTTTTTCAGGTGGGCTGTATCGGCCTGATTAAGGCCATTGACAATTTTGATACCGATCACAATGTCCGATTTTCCACGTATGCCGTTCCCATGATCATCGGAGAAATCCGGCGGTATTTAAGAGACAACAATTCCGTTCGGGTCAGCCGTTCTTTGAGAGATACCGCATACAAGGCGATGCAGGCAAAAGAAAGGCTCATGTCGGCCAATCAAAAGGAGCCGTCGGTGGAGGAAATAGCCAAGGAGCTGGATATGAAGCGAACGGATGTGGTCATGGCGCTGGAAAGCATTGTTGAGCCTATTTCGCTCTATGAACCGGTTTATTCCGACGGGGGCGACACGATTTATGTGATGGATCAAATCGGCGACAAGAATGACGATAACAACTGGGTGGATGAAATTGTCCTGAAGCAGGCAATTGTCAAGCTTTCAGAACGGGAAAAAAAGATTCTGAGCTTACGCTTTATTGTGGGCAGAACCCAAATGGAGGTTGCCAATGAAATCGGCATCAGTCAGGCACAGGTCAGCAGGCTGGAAAAAGGCGCTCTTGACCGGGTGAAAAAACAAATATAA
PROTEIN sequence
Length: 257
LYNNKVEICGVNTSKLVVLKESKKIELLKKMKEGDMKARDELISGNLKLVLSVIKKFTGRGENLDDLFQVGCIGLIKAIDNFDTDHNVRFSTYAVPMIIGEIRRYLRDNNSVRVSRSLRDTAYKAMQAKERLMSANQKEPSVEEIAKELDMKRTDVVMALESIVEPISLYEPVYSDGGDTIYVMDQIGDKNDDNNWVDEIVLKQAIVKLSEREKKILSLRFIVGRTQMEVANEIGISQAQVSRLEKGALDRVKKQI*