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SCNpilot_BF_INOC_scaffold_3127_7

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: comp(5049..6104)

Top 3 Functional Annotations

Value Algorithm Source
Hydrogenase expression/formation protein HypD n=7 Tax=Clostridium thermocellum RepID=A3DJT1_CLOTH similarity UNIREF
DB: UNIREF100
  • Identity: 57.7
  • Coverage: 345.0
  • Bit_score: 423
  • Evalue 1.60e-115
[NiFe] hydrogenase metallocenter assembly protein HypD {ECO:0000313|EMBL:GAE88403.1}; TaxID=1294263 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" sour similarity UNIPROT
DB: UniProtKB
  • Identity: 58.3
  • Coverage: 345.0
  • Bit_score: 430
  • Evalue 2.50e-117
hydrogenase expression/formation protein HypD similarity KEGG
DB: KEGG
  • Identity: 57.7
  • Coverage: 345.0
  • Bit_score: 423
  • Evalue 4.60e-116

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Taxonomy

[Clostridium] straminisolvens → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1056
ATGACCACGCTTGAAAAAATCATGGAACAGTTAAAGCATTATGATGGTCCGCCCATTCAAATCATGGAGGTTTGCGGCACCCACACAAGTGCGATTTTGAAAACCGGGGTGAAGGATCTTGTTTCGGATCGGATCAAGCTGATTTCCGGTCCTGGTTGTCCTGTCTGTGTCACACCGGCTTCCTTTGTTGACCGGCTGGTTTCCCTTTCCTTACAGCCGAACACCTGTATCCTGAGCTTCGGCGATATGATGAAGGTAACGGGAACCGAAGCCTCTTTGACCGGGGCAAAAGCAAAGGGGGGCCATGTTTCTCTGATTCATTCCCCCTTGCAGGCGATCAAGCTGGCCGAAGAAAACCCGGACATTCAGTATATCATTGCCGCGGTGGGTTTTGAAACGACCACCCCTTCCTACGCACTTTTGATAGACAGTATGGTAAAAAACAATATCAAGAACATCAAGCTTTTGACCAGCTTAAAAACCATTTCTCCTGCTATCGGTTTTGTTTGTGAAAATGTTAACGACATAGACGCGTTTTTGTGTCCCGGTCATGTCAGTGTTATTGTGGGGAGCAAAAGCTTTGAACATCTGGCAGAGCTCTACCACAAGCCTTTTGTAATTGCAGGTTTTGACGGTCCCCAGATTTTGGCAGCGGTGCTTGCCATTGTTTATCAGATCTGTGACAAAAAAGGCGAGATGAAAAGCCTGTATAAAAGTGTGGTCAGTTATGACGGAAACCCGGCGGCACAGAATATCACCCAAAGGTATTTCACTCCTTATGACGCTTTGTGGCGTGGCATTGGTGTGATTGGCGGCTCTGGGTTACGGCTTCGGGACGAATATGCATTTCTTGATGCCGGGACAGAGGAGGAATATGACCGGCAGGCTGCGGGGTGCAGCTGCAGTGATATTATTCTCGGCAAATTGTCACCGGAGGAATGCCCCCTGTTCGGCGGAGTGTGCACGCCCCTGTCCCCCGTGGGGCCCTGCATGGTGTCGGCGGAGGGAGCCTGCGGGATTTATTATCGGTTCGGGAAAAGAGGAATGACATCATGA
PROTEIN sequence
Length: 352
MTTLEKIMEQLKHYDGPPIQIMEVCGTHTSAILKTGVKDLVSDRIKLISGPGCPVCVTPASFVDRLVSLSLQPNTCILSFGDMMKVTGTEASLTGAKAKGGHVSLIHSPLQAIKLAEENPDIQYIIAAVGFETTTPSYALLIDSMVKNNIKNIKLLTSLKTISPAIGFVCENVNDIDAFLCPGHVSVIVGSKSFEHLAELYHKPFVIAGFDGPQILAAVLAIVYQICDKKGEMKSLYKSVVSYDGNPAAQNITQRYFTPYDALWRGIGVIGGSGLRLRDEYAFLDAGTEEEYDRQAAGCSCSDIILGKLSPEECPLFGGVCTPLSPVGPCMVSAEGACGIYYRFGKRGMTS*