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SCNpilot_BF_INOC_scaffold_3127_8

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: comp(6091..6318)

Top 3 Functional Annotations

Value Algorithm Source
Hydrogenase assembly chaperone hypC/hupF n=7 Tax=Clostridium thermocellum RepID=A3DJT2_CLOTH similarity UNIREF
DB: UNIREF100
  • Identity: 49.3
  • Coverage: 75.0
  • Bit_score: 80
  • Evalue 9.60e-13
[NiFe] hydrogenase metallocenter assembly protein HypC {ECO:0000313|EMBL:GAE88404.1}; TaxID=1294263 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" sour similarity UNIPROT
DB: UniProtKB
  • Identity: 48.0
  • Coverage: 75.0
  • Bit_score: 82
  • Evalue 2.70e-13
hydrogenase assembly chaperone HypC/HupF similarity KEGG
DB: KEGG
  • Identity: 49.3
  • Coverage: 75.0
  • Bit_score: 80
  • Evalue 2.70e-13

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Taxonomy

[Clostridium] straminisolvens → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 228
ATGTGTATTGCAACAGCAGGTTTGGTCATGAGCATGGACGGTGACAACGCTAAGGTGCTGGTGGGCGGAAATATACTTACCATCAATATCAGCCTTGTCAACCCAACGGTGGGGGACTATGTCCTTTTGCATGCGGGCTGTGCCATTGAAATCATCAAAGAAGACAGCGCAAAGGAGCTCATGGATATTCACAAAGAGCTGGAGGGGCTGATGAATGACCACGCTTGA
PROTEIN sequence
Length: 76
MCIATAGLVMSMDGDNAKVLVGGNILTINISLVNPTVGDYVLLHAGCAIEIIKEDSAKELMDIHKELEGLMNDHA*