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SCNpilot_BF_INOC_scaffold_3127

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_3127_1
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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326..1207
DNA (882bp) protein (294aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:
Methionine--tRNA ligase n=1 Tax=Clostridium leptum CAG:27 RepID=R6N5D5_9CLOT
methionyl-tRNA synthetase
SCNpilot_BF_INOC_scaffold_3127_2
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1200..1976
DNA (777bp) protein (259aa)
hydrolase, TatD family (EC:3.1.21.-)
Hydrolase TatD family n=1 Tax=Clostridium sp. CAG:413 RepID=R6NIV9_9CLOT
Hydrolase TatD family {ECO:0000313|EMBL:CDC12063.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium s
SCNpilot_BF_INOC_scaffold_3127_3
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1987..2583
DNA (597bp) protein (199aa)
radical SAM protein n=1 Tax=Clostridium arbusti RepID=UPI00028844B7
radical SAM protein
Radical SAM protein {ECO:0000313|EMBL:CDZ23297.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
SCNpilot_BF_INOC_scaffold_3127_4
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

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2595..3173
DNA (579bp) protein (193aa)
Predicted hydrolases of HD superfamily (EC:3.1.3.5)
5'-nucleotidase YfbR n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6ZB79_9FIRM
5'-nucleotidase YfbR {ECO:0000313|EMBL:CDD27727.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
SCNpilot_BF_INOC_scaffold_3127_5
BJP_IG2157_Clostridiales_52_13, Dethiosulfatibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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3192..4019
DNA (828bp) protein (276aa)
Aspartate/glutamate/uridylate kinase n=1 Tax=Clostridium sp. CAG:1024 RepID=R5AUE9_9CLOT
aspartate/glutamate/uridylate kinase
Tax=BJP_IG2157_Clostridiales_52_13
SCNpilot_BF_INOC_scaffold_3127_6
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4075..5052)
DNA (978bp) protein (326aa)
Hydrogenase expression/formation protein HypE n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R568_CLOSW
Carbamoyl dehydratase HypE {ECO:0000313|EMBL:KEZ90522.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
hydrogenase expression/formation protein HypE
SCNpilot_BF_INOC_scaffold_3127_7
[Clostridium] straminisolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5049..6104)
DNA (1056bp) protein (352aa)
Hydrogenase expression/formation protein HypD n=7 Tax=Clostridium thermocellum RepID=A3DJT1_CLOTH
[NiFe] hydrogenase metallocenter assembly protein HypD {ECO:0000313|EMBL:GAE88403.1}; TaxID=1294263 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" sour
hydrogenase expression/formation protein HypD
SCNpilot_BF_INOC_scaffold_3127_8
[Clostridium] straminisolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6091..6318)
DNA (228bp) protein (76aa)
Hydrogenase assembly chaperone hypC/hupF n=7 Tax=Clostridium thermocellum RepID=A3DJT2_CLOTH
[NiFe] hydrogenase metallocenter assembly protein HypC {ECO:0000313|EMBL:GAE88404.1}; TaxID=1294263 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" sour
hydrogenase assembly chaperone HypC/HupF
SCNpilot_BF_INOC_scaffold_3127_9
unknown

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comp(6319..6429)
DNA (111bp) protein (37aa)

This feature has no annotations

Displaying 9 items

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