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SCNpilot_BF_INOC_scaffold_715_23

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: comp(25869..26285)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S12 n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RRQ3_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 89.1
  • Coverage: 137.0
  • Bit_score: 247
  • Evalue 8.30e-63
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" s similarity UNIPROT
DB: UniProtKB
  • Identity: 89.1
  • Coverage: 137.0
  • Bit_score: 247
  • Evalue 1.20e-62
30S ribosomal protein S12 similarity KEGG
DB: KEGG
  • Identity: 88.3
  • Coverage: 137.0
  • Bit_score: 246
  • Evalue 5.20e-63

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Taxonomy

Subdoligranulum sp. 4_3_54A2FAA → Subdoligranulum → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 417
ATGCCAACCTTTAATCAGTTAGTTCGCAAAGGCAGAGAATCTATGGAGAAAAAGTCGACCGCTCCTGCTCTTCAAAAGGGTTTTAACTCGAAGAAACAGAGATCGACTGACCAAAGCTCTCCCCAGAAACGCGGTGTTTGCACAACAGTTAAAACAATGACTCCGAAAAAACCTAACTCAGCGCTTCGTAAAGTTGCCAGAGTTCGTCTTTCCAACGGAATTGAAGTCACTTCATACATTCCGGGTGTGGGACACAATTTGCAGGAGCATAGCGTTGTTTTGATCCGTGGCGGACGTGTTAAGGATCTTCCCGGTGTGCGTTACCACATTATCCGCGGAACACTTGACGCACAGGGCGTTGCGAACAGAAAACAAGCTCGTTCTAAGTACGGTGCCAAGAGACCAAAGGCCAAATAG
PROTEIN sequence
Length: 139
MPTFNQLVRKGRESMEKKSTAPALQKGFNSKKQRSTDQSSPQKRGVCTTVKTMTPKKPNSALRKVARVRLSNGIEVTSYIPGVGHNLQEHSVVLIRGGRVKDLPGVRYHIIRGTLDAQGVANRKQARSKYGAKRPKAK*